RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 APBB2Q92870 758 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 TIGD1Q96MW7 591 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 OSMRQ99650 979 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 REEP2Q9BRK0 252 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 FDXACB1Q9BRP7 624 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-204ENST00000405578 NFKBIZQ9BYH8 718 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 KMT5AQ9NQR1 393 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 CLEC1BQ9P126 229 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 SEL1LQ9UBV2 794 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 RWDD3Q9Y3V2 267 aa11.62□□□□□ -0.55
RPAIN-204ENST00000405578 USP15Q9Y4E8 981 aaPredicted RBP11.62□□□□□ -0.55
RPAIN-204ENST00000405578 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 MYMKA6NI61 221 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 INO80B-WBP1J3KQ70 363 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
RPAIN-204ENST00000405578 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ERLIN2O94905 339 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 PDGFBP01127 241 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-204ENST00000405578 GHRP10912 638 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ID4P47928 161 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 PEX3P56589 373 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 STXBP4Q6ZWJ1 553 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ADGRD2Q7Z7M1 963 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 KSR1Q8IVT5 923 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 SPIRE2Q8WWL2 714 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 RPGRIP1Q96KN7 1286 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 FTHL17Q9BXU8 183 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 TRIM9Q9C026 710 aa11.61□□□□□ -0.55
RPAIN-204ENST00000405578 BARX2Q9UMQ3 279 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-204ENST00000405578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 SFI1A8K8P3 1242 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 GALR2O43603 387 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 TRAK2O60296 914 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 SMC2O95347 1197 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 ZSCAN20P17040 1043 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 NBL1P41271 181 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 NPTX2P47972 431 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 ZNF131P52739 623 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PTENP60484 403 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 NFX1Q12986 1120 aaKnown RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 COASYQ13057 564 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 CAPSQ13938 189 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 CAMK1Q14012 370 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 LPIN1Q14693 890 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 MAPK6Q16659 721 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 CNNM4Q6P4Q7 775 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 CATSPER4Q7RTX7 472 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 EFHBQ8N7U6 833 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 STAMQ92783 540 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 ZNF668Q96K58 619 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 NTPCRQ9BSD7 190 aaKnown RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 DACT1Q9NYF0 836 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PADI3Q9ULW8 664 aa11.6□□□□□ -0.55
RPAIN-204ENST00000405578 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 K7ERI5 159 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 NR1I2O75469 434 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 GLP2RO95838 553 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 MBD3O95983 291 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 MAPTP10636 758 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 LIG1P18858 919 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 CD52P31358 61 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 STRN3Q13033 797 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 MAPK7Q13164 816 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 ALCAMQ13740 583 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 BTG3Q14201 252 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 POSTNQ15063 836 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 PTPN21Q16825 1174 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 CDCA2Q69YH5 1023 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 UNC13DQ70J99 1090 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 ELOA2Q8IYF1 753 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 DAW1Q8N136 415 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 CLP1Q92989 425 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 DNAJC19Q96DA6 116 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 PRIMPOLQ96LW4 560 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 MRPL44Q9H9J2 332 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 CDHR5Q9HBB8 845 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 RC3H2Q9HBD1 1191 aaKnown RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 IFT122Q9HBG6 1241 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 CHST12Q9NRB3 414 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 LMBRD1Q9NUN5 540 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
RPAIN-204ENST00000405578 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-204ENST00000405578 RMND1Q9NWS8 449 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms