RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SNRNP35Q16560 246 aaKnown RBP22.85■■□□□ 1.25
TPM1-208ENST00000404484 GBP6Q6ZN66 633 aa22.85■■□□□ 1.25
TPM1-208ENST00000404484 KAT2BQ92831 832 aa22.85■■□□□ 1.25
TPM1-208ENST00000404484 NLRP4Q96MN2 994 aa22.85■■□□□ 1.25
TPM1-208ENST00000404484 FAM207AQ9NSI2 230 aaPredicted RBP22.85■■□□□ 1.25
TPM1-208ENST00000404484 AKT3Q9Y243 479 aa22.85■■□□□ 1.25
TPM1-208ENST00000404484 HAS3O00219 553 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 LDHAP00338 332 aaKnown RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 PRKCBP05771 671 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 SMIM10L2AP0DMW4 78 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 SMIM10L2BP0DMW5 78 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 FECHP22830 423 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 KLK7P49862 253 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 VAMP7P51809 220 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 FAAP100Q0VG06 881 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 KCNMA1Q12791 1236 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 EXOC3L4Q17RC7 722 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 CHRDL2Q6WN34 429 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 RDH13Q8NBN7 331 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 DNAJC7Q99615 494 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 MTG1Q9BT17 334 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 LSM14BQ9BX40 385 aaKnown RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 ZNHIT6Q9NWK9 470 aaKnown RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 COLQQ9Y215 455 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 TRIOBPQ9H2D6 2365 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 TRIM43BA6NCK2 446 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 EXTL3O43909 919 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 MCCD1P59942 119 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 CETN1Q12798 172 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 IFNLR1Q8IU57 520 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 TMTC1Q8IUR5 882 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 TMEM139Q8IV31 216 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 LMBR1Q8WVP7 490 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 TRIM43Q96BQ3 446 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 NUCKS1Q9H1E3 243 aaKnown RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 PLCB1Q9NQ66 1216 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 PRDM5Q9NQX1 630 aaPredicted RBP22.84■■□□□ 1.25
TPM1-208ENST00000404484 CEP72Q9P209 647 aa22.84■■□□□ 1.25
TPM1-208ENST00000404484 EVPLQ92817 2033 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 DCDC2CA8MYV0 355 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 P4HA2O15460 535 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 CCP110O43303 1012 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 GNAT1P11488 350 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 FMO5P49326 533 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 MARCH8Q5T0T0 291 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 NFRKBQ6P4R8 1299 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 CACNA2D4Q7Z3S7 1137 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 CCDC155Q8N6L0 562 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 TMC2Q8TDI7 906 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 SAAL1Q96ER3 474 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 TARS2Q9BW92 718 aaKnown RBP22.83■■□□□ 1.25
TPM1-208ENST00000404484 PRMT7Q9NVM4 692 aaPredicted RBP22.83■■□□□ 1.25
TPM1-208ENST00000404484 AGO2Q9UKV8 859 aaKnown RBP22.83■■□□□ 1.25
TPM1-208ENST00000404484 DAAM1Q9Y4D1 1078 aa22.83■■□□□ 1.25
TPM1-208ENST00000404484 ZNF233A6NK53 670 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 ACKR2O00590 384 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 TOM1L1O75674 476 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 CLTBP09497 229 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 MATR3P43243 847 aaKnown RBP eCLIP22.82■■□□□ 1.24
TPM1-208ENST00000404484 ZNF410Q86VK4 478 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 CBWD2Q8IUF1 395 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 GDF15Q99988 308 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 PRO3102Q9H379 93 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 FZD8Q9H461 694 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 KCND1Q9NSA2 647 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 SETD4Q9NVD3 440 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 PRKAG2Q9UGJ0 569 aa22.82■■□□□ 1.24
TPM1-208ENST00000404484 GOLGA8IPA6NC78 632 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 GOLGA8JA6NMD2 632 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 INO80B-WBP1J3KQ70 363 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 MAGEA10P43363 369 aaPredicted RBP22.81■■□□□ 1.24
TPM1-208ENST00000404484 MYL7Q01449 175 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 FAM187BQ17R55 369 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 NBPF20Q3BBV1 942 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 CYP26C1Q6V0L0 522 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 FAM126BQ8IXS8 530 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 ZNF710Q8N1W2 664 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 PPP1R13LQ8WUF5 828 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 MFSD14AQ96MC6 490 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 CRACR2AQ9BSW2 395 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 MSTO1Q9BUK6 570 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 INO80BQ9C086 356 aaPredicted RBP22.81■■□□□ 1.24
TPM1-208ENST00000404484 SPTLC3Q9NUV7 552 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 TMEM39AQ9NV64 488 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 GCNT4Q9P109 453 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 MROH7Q68CQ1 1323 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 LAMA3Q16787 3333 aa22.81■■□□□ 1.24
TPM1-208ENST00000404484 A0A0B4J269 797 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 SMIM35A0A1B0GVV1 85 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 MBLAC1A4D2B0 266 aaPredicted RBP22.8■■□□□ 1.24
TPM1-208ENST00000404484 PMM2O15305 246 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 CLDN3O15551 220 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 ADRB2P07550 413 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 TRIM49P0CI25 452 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 TRIM49CP0CI26 452 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 ITGB8P26012 769 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 GTF2H1P32780 548 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 CHMP4BP1P59074 171 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 CYP24A1Q07973 514 aa22.8■■□□□ 1.24
TPM1-208ENST00000404484 NOLC1Q14978 699 aaKnown RBP eCLIP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms