RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PYGMP11217 842 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 QARSP47897 775 aaKnown RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 MARCKSL1P49006 195 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 RWDD2BP57060 319 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 TNFAIP8L3Q5GJ75 292 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 TAOK1Q7L7X3 1001 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 NOP9Q86U38 636 aaKnown RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC197Q8NCU1 140 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 MDM1Q8TC05 714 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 SHC3Q92529 594 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 SEMA4AQ9H3S1 761 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 LRRC19Q9H756 370 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 EXOC7Q9UPT5 735 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 TLDC2A0PJX2 215 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 H0YIN7 160 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 DDX39AO00148 427 aaKnown RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 CHUKO15111 745 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 RIPK2O43353 540 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 FMO1Q01740 532 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 KCTD19Q17RG1 926 aaPredicted RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 KRT39Q6A163 491 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF746Q6NUN9 644 aaPredicted RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 ATXN2LQ8WWM7 1075 aaKnown RBP11.53□□□□□ -0.56
CLIP4-204ENST00000404424 CCT6BQ92526 530 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 SLCO2A1Q92959 643 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 NUP85Q9BW27 656 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 AZI2Q9H6S1 392 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 SLC40A1Q9NP59 571 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 COQ4Q9Y3A0 265 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 TISP43B9A030 160 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 TBC1D12O60347 775 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 ICAM1P05362 532 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 PDE6CP51160 858 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 CDR2Q01850 454 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 CALCOCO2Q13137 446 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 ITIH4Q14624 930 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.56
CLIP4-204ENST00000404424 AOC3Q16853 763 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 MFSD5Q6N075 450 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 TRMT10CQ7L0Y3 403 aaKnown RBP11.52□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC91Q7Z6B0 441 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 MCF2L2Q86YR7 1114 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 PPM1KQ8N3J5 372 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 KIFAP3Q92845 792 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 AKT1S1Q96B36 256 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 HVCN1Q96D96 273 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 KREMEN1Q96MU8 473 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 SELENOSQ9BQE4 189 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 TBC1D22BQ9NU19 505 aa11.52□□□□□ -0.56
CLIP4-204ENST00000404424 INTS9Q9NV88 658 aaKnown RBP11.52□□□□□ -0.56
CLIP4-204ENST00000404424 DNM1LO00429 736 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 RASGRF2O14827 1237 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 CYP26A1O43174 497 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 ECEL1O95672 775 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 CYP11B1P15538 503 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 YWHABP31946 246 aaKnown RBP11.52□□□□□ -0.57
CLIP4-204ENST00000404424 PTGER2P43116 358 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 SCTRP47872 440 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 GPC3P51654 580 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 GHRHRQ02643 423 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 PIGWQ7Z7B1 504 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 SLC47A2Q86VL8 602 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 SUPT20HQ8NEM7 779 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 MAIP1Q8WWC4 291 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 KAT5Q92993 513 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 ZNF653Q96CK0 615 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 AGO4Q9HCK5 861 aaKnown RBP11.52□□□□□ -0.57
CLIP4-204ENST00000404424 TMEM8AQ9HCN3 771 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 WHRNQ9P202 907 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 UBIAD1Q9Y5Z9 338 aa11.52□□□□□ -0.57
CLIP4-204ENST00000404424 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 FSCN2O14926 492 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 DNAJC8O75937 253 aaPredicted RBP11.51□□□□□ -0.57
CLIP4-204ENST00000404424 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 RARAP10276 462 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 PPARDQ03181 441 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 XRCC4Q13426 336 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 TKFCQ3LXA3 575 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 USP37Q86T82 979 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 CNKSR1Q969H4 720 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 MAP3K20Q9NYL2 800 aaKnown RBP11.51□□□□□ -0.57
CLIP4-204ENST00000404424 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 CCT8L1PA6NM43 557 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 GTF2H1P32780 548 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 MAN1A1P33908 653 aa11.51□□□□□ -0.57
CLIP4-204ENST00000404424 CAP2P40123 477 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms