RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NSUN6Q8TEA1 469 aaKnown RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZNF480Q8WV37 535 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 CARD11Q9BXL7 1154 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 KATNBL1Q9H079 304 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 FAM204AQ9H8W3 233 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 DDX21Q9NR30 783 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 TDP1Q9NUW8 608 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 TRPS1Q9UHF7 1281 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 AJAP1Q9UKB5 411 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 POLHQ9Y253 713 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 STXBP5LQ9Y2K9 1186 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 FAM171A2A8MVW0 826 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 NPIPB6E9PJ23 425 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 PQBP1O60828 265 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZBED1O96006 694 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 MED14OSP0DP75 135 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 SLC5A1P13866 664 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 PTPN7P35236 360 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 KIR2DL3P43628 341 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 AFF3P51826 1226 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 MEF2AQ02078 507 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 NOGQ13253 232 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 HLTFQ14527 1009 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 USP10Q14694 798 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 BRD3Q15059 726 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 CNN3Q15417 329 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 KRT40Q6A162 431 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 DAAM2Q86T65 1068 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 TRMT2AQ8IZ69 625 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 KIAA0319LQ8IZA0 1049 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 TP53I13Q8NBR0 393 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 GFM2Q969S9 779 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 DACT3Q96B18 629 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 MBD6Q96DN6 1003 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 AJUBAQ96IF1 538 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 FAM84AQ96KN4 292 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 NAA15Q9BXJ9 866 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 TMEM60Q9H2L4 133 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 CD320Q9NPF0 282 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 GPRC5DQ9NZD1 345 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 ACTL7AQ9Y615 435 aa4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 CFAP20Q9Y6A4 193 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 MYBBP1AQ9BQG0 1328 aaKnown RBP4.92□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZMYM3Q14202 1370 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 SH3D21A4FU49 640 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 FAM227AF5H4B4 570 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 H3BUI4 141 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ENDOD1O94919 500 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 SERPINB3P29508 390 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 LINC00310P59036 64 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 RAB1AP62820 205 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 CDC42EP1Q00587 391 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 PICALMQ13492 652 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 HDAC1Q13547 482 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 SAFB2Q14151 953 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZNF827Q17R98 1081 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 PRAMEF14Q5SWL7 426 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 RNF220Q5VTB9 566 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 TTC7BQ86TV6 843 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZNF761Q86XN6 746 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 OR7D4Q8NG98 312 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 TTC17Q96AE7 1141 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 CEP95Q96GE4 821 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 MRGPRX4Q96LA9 322 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 SAMD11Q96NU1 681 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 MYOCQ99972 504 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 SENP6Q9GZR1 1112 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 OR10A2Q9H208 303 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZMAT3Q9HA38 289 aaKnown RBP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 BARX1Q9HBU1 254 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 KMT5AQ9NQR1 393 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 LMBRD1Q9NUN5 540 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 FNIP2Q9P278 1114 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 CPA4Q9UI42 421 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 VWA7Q9Y334 891 aa4.91□□□□□ -1.62
HMGB1P17-201ENST00000403495 CFAP69A5D8W1 941 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 CAPN8A6NHC0 703 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PHF2O75151 1096 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 STC2O76061 302 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 FARP2O94887 1054 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 DDCP20711 480 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 AGFG1P52594 562 aaKnown RBP4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 HK3P52790 923 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 ADAM8P78325 824 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 DUSP2Q05923 314 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 SNAPC2Q13487 334 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 PLS1Q14651 629 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZNF124Q15973 351 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 KCNA10Q16322 511 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 LONRF1Q17RB8 773 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 FAM214AQ32MH5 1076 aa4.9□□□□□ -1.63
HMGB1P17-201ENST00000403495 ANO6Q4KMQ2 910 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms