RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 MXD4Q14582 209 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 KLHL23Q8NBE8 558 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 SPPL3Q8TCT6 385 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 TRAIPQ9BWF2 469 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
SMIM11A-201ENST00000399292 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 H3BQV1 296 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 NCK2O43639 380 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 MED24O75448 989 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 ITGB1P05556 798 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 RPA1P27694 616 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 PHKA2P46019 1235 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 TFDP1Q14186 410 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 PDIA5Q14554 519 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 UBE2ZQ9H832 354 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 XPNPEP1Q9NQW7 623 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 NCOR1O75376 2440 aa13.08□□□□□ -0.32
SMIM11A-201ENST00000399292 ZNF623O75123 536 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 ARL2P36404 184 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 KCNQ1P51787 676 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 POU5F1BQ06416 359 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 INTS6LQ5JSJ4 861 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 ADAMTS19Q8TE59 1207 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 POF1BQ8WVV4 589 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 RAB34Q9BZG1 259 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 CWH43Q9H720 699 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 MINDY3Q9H8M7 445 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 FAM105AQ9NUU6 356 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 RNF19AQ9NV58 838 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 LRWD1Q9UFC0 647 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 DBR1Q9UK59 544 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
SMIM11A-201ENST00000399292 WDR81Q562E7 1941 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LAD1O00515 517 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 SPINT1O43278 529 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 FGF18O76093 207 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 CSPG5O95196 566 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LAG3P18627 525 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 MUTP22033 750 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 KCNA5P22460 613 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 DNAJB1P25685 340 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 HOXA11P31270 313 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 RAB27AP51159 221 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 PTENP60484 403 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 UBE3AQ05086 875 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 CAMK1Q14012 370 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LRRC55Q6ZSA7 311 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 UHRF1Q96T88 793 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-201ENST00000399292 ARHGEF35A5YM69 484 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 ERLIN2O94905 339 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 ATF7P17544 494 aaPredicted RBP13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 GLRA2P23416 452 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 KRT17Q04695 432 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 LEXMQ3ZCV2 418 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 LONRF3Q496Y0 759 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 ASAP3Q8TDY4 903 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 EPS8L1Q8TE68 723 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 LPPQ93052 612 aa13.05□□□□□ -0.32
SMIM11A-201ENST00000399292 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms