RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ZNF653Q96CK0 615 aa14.09□□□□□ -0.15
PRAME-201ENST00000398741 PGM2Q96G03 612 aa14.09□□□□□ -0.15
PRAME-201ENST00000398741 SH2D3AQ9BRG2 576 aa14.09□□□□□ -0.15
PRAME-201ENST00000398741 EPB41L4BQ9H329 900 aa14.09□□□□□ -0.15
PRAME-201ENST00000398741 NOCTQ9UK39 431 aaKnown RBP14.09□□□□□ -0.15
PRAME-201ENST00000398741 SLC16A4O15374 487 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
PRAME-201ENST00000398741 PYGMP11217 842 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 CHRNB2P17787 502 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PEX5P50542 639 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PDE6CP51160 858 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PEX3P56589 373 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 ADCY2Q08462 1091 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 SLC29A2Q14542 456 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 TTC27Q6P3X3 843 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 KCNV1Q6PIU1 500 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 NIPA1Q7RTP0 329 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 TRMT1LQ7Z2T5 733 aaKnown RBP14.08□□□□□ -0.16
PRAME-201ENST00000398741 SLC47A2Q86VL8 602 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 CCDC13Q8IYE1 715 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 ZSWIM2Q8NEG5 633 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PLEKHO2Q8TD55 490 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 TATDN2Q93075 761 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
PRAME-201ENST00000398741 CENPTQ96BT3 561 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 CHMP6Q96FZ7 201 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 XPO6Q96QU8 1125 aaKnown RBP14.08□□□□□ -0.16
PRAME-201ENST00000398741 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 AGO4Q9HCK5 861 aaKnown RBP14.08□□□□□ -0.16
PRAME-201ENST00000398741 EXOC7Q9UPT5 735 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 RPTORQ8N122 1335 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PASKQ96RG2 1323 aa14.08□□□□□ -0.16
PRAME-201ENST00000398741 PHF20L1A8MW92 1017 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 DHX15O43143 795 aaKnown RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 ZBTB7AO95365 584 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 MMEP08473 750 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CHN1P15882 459 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CAP2P40123 477 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 MTMR1Q13613 665 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 SLMAPQ14BN4 828 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 TBC1D10BQ4KMP7 808 aaPredicted RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 ERMARDQ5T6L9 678 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 MCF2L2Q86YR7 1114 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CCDC114Q96M63 670 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 TIPINQ9BVW5 301 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 FAM129AQ9BZQ8 928 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 DEFB129Q9H1M3 183 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 ST6GALNAC4Q9H4F1 302 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 COL20A1Q9P218 1284 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CNOT7Q9UIV1 285 aaKnown RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 NFIBO00712 420 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 PMM2O15305 246 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 ADRB2P07550 413 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 COILP38432 576 aaPredicted RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 RWDD2BP57060 319 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 KRT39Q6A163 491 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CD101Q93033 1021 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 CCDC127Q96BQ5 260 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 KREMEN1Q96MU8 473 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 GLIS2Q9BZE0 524 aaPredicted RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 STMN4Q9H169 189 aaPredicted RBP14.07□□□□□ -0.16
PRAME-201ENST00000398741 SEMA4AQ9H3S1 761 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 GTF3C4Q9UKN8 822 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
PRAME-201ENST00000398741 LYPLA2O95372 231 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 AGTP01019 485 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 CYP1A2P05177 515 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 ALAS1P13196 640 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 FGFR4P22455 802 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 FMO1Q01740 532 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
PRAME-201ENST00000398741 CYFIP1Q7L576 1253 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 CBWD2Q8IUF1 395 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 UHMK1Q8TAS1 419 aaKnown RBP14.06□□□□□ -0.16
PRAME-201ENST00000398741 SHC3Q92529 594 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 KIFAP3Q92845 792 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 CEP89Q96ST8 783 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 PLVAPQ9BX97 442 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 UVRAGQ9P2Y5 699 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 CYP11B1P15538 503 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 DRD4P21917 467 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 PTGER2P43116 358 aa14.06□□□□□ -0.16
PRAME-201ENST00000398741 MMP13P45452 471 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms