RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 C2CD5Q86YS7 1000 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 NUP93Q8N1F7 819 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF610Q8N9Z0 462 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 GSDMBQ8TAX9 411 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 KLHDC4Q8TBB5 520 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 UTP15Q8TED0 518 aaKnown RBP7.49□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF606Q8WXB4 792 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 PIGSQ96S52 555 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 EYA3Q99504 573 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 PDCD2LQ9BRP1 358 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 PHF20Q9BVI0 1012 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 FEM1BQ9UK73 627 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 SLC39A10Q9ULF5 831 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 COG5Q9UP83 839 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 STXBP5LQ9Y2K9 1186 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 NWD1Q149M9 1564 aa7.49□□□□□ -1.21
SMCO1-201ENST00000397537 TTLL8A6PVC2 850 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 DTNBO60941 627 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 CLEC3AO75596 197 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 EDNRBP24530 442 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ATP5DP30049 168 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 KCNQ4P56696 695 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 RNASE9P60153 205 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 C1QTNF8P60827 252 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ARF3P61204 181 aaPredicted RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ARF1P84077 181 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 FOXO4P98177 505 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 SATB1Q01826 763 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 PLAURQ03405 335 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 KIAA2012Q0VF49 1180 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 MAP3K1Q13233 1512 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 GPR139Q6DWJ6 353 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 TRIML1Q8N9V2 468 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 CEP70Q8NHQ1 597 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ST8SIA4Q92187 359 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF566Q969W8 418 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF845Q96IR2 970 aaPredicted RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 USP26Q9BXU7 913 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 NLRP1Q9C000 1473 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 HPF1Q9NWY4 346 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 SRP68Q9UHB9 627 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 SPO11Q9Y5K1 396 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 EPN1Q9Y6I3 576 aaPredicted RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 VGLL3A8MV65 326 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ERAL1O75616 437 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 MLYCDO95822 493 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 JUPP14923 745 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 GPC1P35052 558 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 NLRP5P59047 1200 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 GPR85P60893 370 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 POLR2FP61218 127 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 MAP3K12Q12852 859 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 TNIP1Q15025 636 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 TAF7Q15545 349 aaPredicted RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 INF2Q27J81 1249 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 TJAP1Q5JTD0 557 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 FAM26FQ5R3K3 315 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ACAD10Q6JQN1 1059 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 OTOP1Q7RTM1 612 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 KCNK18Q7Z418 384 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 SIRT2Q8IXJ6 389 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 LRRC71Q8N4P6 559 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 CISD2Q8N5K1 135 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ZNF540Q8NDQ6 660 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 GIMAP1Q8WWP7 306 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 HEPHQ9BQS7 1158 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 EDEM3Q9BZQ6 932 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 QRSL1Q9H0R6 528 aaKnown RBP7.48□□□□□ -1.21
SMCO1-201ENST00000397537 GP6Q9HCN6 339 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 FANCFQ9NPI8 374 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 LIMCH1Q9UPQ0 1083 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 NR2E3Q9Y5X4 410 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 BACE2Q9Y5Z0 518 aa7.48□□□□□ -1.21
SMCO1-201ENST00000397537 A0A088AWK7 358 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 PRAMEF27A3QJZ7 478 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.47□□□□□ -1.21
SMCO1-201ENST00000397537 MSCO60682 206 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 TPPPO94811 219 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 APBB3O95704 486 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 ENPP1P22413 925 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 ACSL1P33121 698 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 DNM2P50570 870 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 SEC24CP53992 1094 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 RAB1AP62820 205 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 SHROOM1Q2M3G4 852 aaPredicted RBP7.47□□□□□ -1.21
SMCO1-201ENST00000397537 C1orf141Q5JVX7 400 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 DNTTIP2Q5QJE6 756 aaKnown RBP7.47□□□□□ -1.21
SMCO1-201ENST00000397537 TANGO2Q6ICL3 276 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 CRTC1Q6UUV9 634 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 RTN4RL1Q86UN2 441 aaPredicted RBP7.47□□□□□ -1.21
SMCO1-201ENST00000397537 NGEFQ8N5V2 710 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 C2orf69Q8N8R5 385 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 TTC9Q92623 222 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 CNPY2Q9Y2B0 182 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 HIF3AQ9Y2N7 669 aa7.47□□□□□ -1.21
SMCO1-201ENST00000397537 PLXNC1O60486 1568 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms