RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 FBF1Q8TES7 1133 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DYDC1Q8WWB3 177 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 LRRC45Q96CN5 670 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 BTBD6Q96KE9 485 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 IFT74Q96LB3 600 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 THAP2Q9H0W7 228 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DNAAF2Q9NVR5 837 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 AIPL1Q9NZN9 384 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DNAJC12Q9UKB3 198 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 PPP1R9AQ9ULJ8 1098 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 USP20Q9Y2K6 914 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 COL24A1Q17RW2 1714 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 A0A1B0GVG6 124 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 SPDYE5A6NIY4 337 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 EIF4E1BA6NMX2 242 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 ASAP2O43150 1006 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 APBA3O96018 575 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 H2AFZP0C0S5 128 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 MYBL1P10243 752 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ALDH1B1P30837 517 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 STAT1P42224 750 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 GCLMP48507 274 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ZNF131P52739 623 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 SOX10P56693 466 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DHX9Q08211 1270 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 ORC2Q13416 577 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 EPHA7Q15375 998 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 PPP1R18Q6NYC8 613 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 HHIPL2Q6UWX4 724 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 H2AFVQ71UI9 128 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 TRPM8Q7Z2W7 1104 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 LNX1Q8TBB1 728 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 SLC35G2Q8TBE7 412 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 SLC20A1Q8WUM9 679 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 KAT5Q92993 513 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 CCDC127Q96BQ5 260 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ARHGEF26Q96DR7 871 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 CCDC17Q96LX7 622 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 AGBL1Q96MI9 1066 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 INPP4AQ96PE3 977 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 ZNF577Q9BSK1 485 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 KIFC3Q9BVG8 833 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 TMEM39BQ9GZU3 492 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ZWILCHQ9H900 591 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 GPRC5CQ9NQ84 441 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 RNF14Q9UBS8 474 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ATP8A1Q9Y2Q0 1164 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 PTPN22Q9Y2R2 807 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 LAMA3Q16787 3333 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FOXN3O00409 490 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 NPR1P16066 1061 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TNNC1P63316 161 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 UBAP2Q5T6F2 1119 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 ANO7Q6IWH7 933 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TMEM179Q6ZVK1 233 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 OTOP1Q7RTM1 612 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TPCN2Q8NHX9 752 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CENPTQ96BT3 561 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FGD4Q96M96 766 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ZDHHC15Q96MV8 337 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TRAPPC9Q96Q05 1148 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 XPO6Q96QU8 1125 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 POP1Q99575 1024 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 LXNQ9BS40 222 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 IQCGQ9H095 443 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 NSRP1Q9H0G5 558 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 PIDD1Q9HB75 910 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PARVGQ9HBI0 331 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 UBE2TQ9NPD8 197 aaPredicted RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 FBXL5Q9UKA1 691 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 VAV3Q9UKW4 847 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 FZD1Q9UP38 647 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TAF1LQ8IZX4 1826 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PLIN4Q96Q06 1357 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 K7ENM7 598 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 IGF2BP3O00425 579 aaKnown RBP eCLIP5.38□□□□□ -1.551e-6■■■□□ 17.7
SSR1-202ENST00000397511 PDXKO00764 312 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 CTNND1O60716 968 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 WFS1O76024 890 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 UPP2O95045 317 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 DESP17661 470 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 RPL13P26373 211 aaKnown RBP5.38□□□□□ -1.55
SSR1-202ENST00000397511 SREBF1P36956 1147 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 HSD17B3P37058 310 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 SLCO1A2P46721 670 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MARCKSL1P49006 195 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 SCNN1BP51168 640 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 KCNJ2P63252 427 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 KLC1Q07866 573 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 ADCY1Q08828 1119 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 MTMR3Q13615 1198 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TSNAXIP1Q2TAA8 658 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 EDRF1Q3B7T1 1238 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 EPC2Q52LR7 807 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 DACT2Q5SW24 774 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 HYIQ5T013 277 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 PHLDB3Q6NSJ2 640 aa5.38□□□□□ -1.55
SSR1-202ENST00000397511 TMEM154Q6P9G4 183 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms