RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TBX20Q9UMR3 447 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 SZT2Q5T011 3432 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 C5orf67F2Z3F1 127 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 SYKP43405 635 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 AFMP43652 599 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 ALDH7A1P49419 539 aaKnown RBP27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 ASIC1P78348 528 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 KLHL23Q8NBE8 558 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 TBC1D13Q9NVG8 400 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 SNTG2Q9NY99 539 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 KLK14Q9P0G3 267 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 USP25Q9UHP3 1055 aa27.82■■■□□ 2.04
TSPAN4-207ENST00000397411 KIAA1671Q9BY89 1806 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 A0A1W2PQ27 194 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 A0A1W2PQ64 194 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 A0A1W2PQD8 194 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 POMCP01189 267 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 LINC00271P0C7V0 271 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 HARSP12081 509 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 MLH1P40692 756 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 LIG4P49917 911 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 KCNT2Q6UVM3 1135 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 ZPBP2Q6X784 338 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 MAFAQ8NHW3 353 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 MRPS27Q92552 414 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 P2RX5Q93086 422 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 RPS6KC1Q96S38 1066 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 ALG13Q9NP73 1137 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 GDAQ9Y2T3 454 aa27.81■■■□□ 2.04
TSPAN4-207ENST00000397411 ARL5CA6NH57 179 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 SLC34A2O95436 690 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 SLFN14P0C7P3 912 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 CCDC85BQ15834 202 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 MPZL3Q6UWV2 235 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 C7orf25Q9BPX7 421 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 CCDC94Q9BW85 323 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 TRIM9Q9C026 710 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 LMCD1Q9NZU5 365 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 ANKFY1Q9P2R3 1169 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 PLAGL2Q9UPG8 496 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 MTCH2Q9Y6C9 303 aa27.8■■■□□ 2.04
TSPAN4-207ENST00000397411 CLDN3O15551 220 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 LPXNO60711 386 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 ZC3H11AO75152 810 aaKnown RBP eCLIP27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 TOM1L1O75674 476 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 MCF2P10911 925 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 ZC2HC1CQ53FD0 456 aaPredicted RBP27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 ZNF720Q7Z2F6 126 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 SPG21Q9NZD8 308 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 PCDHB13Q9Y5F0 798 aa27.79■■■□□ 2.04
TSPAN4-207ENST00000397411 CARNS1A5YM72 827 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 HNRNPDLO14979 420 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 GRM6O15303 877 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 GCNT3O95395 438 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 POU3F3P20264 500 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 NDUFA8P51970 172 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 YARSP54577 528 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 BCAR1P56945 870 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 OSTNP61366 133 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 GTF2BQ00403 316 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 KRT17Q04695 432 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 ZBTB45Q96K62 511 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 ZFP42Q96MM3 310 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 LMAN2LQ9H0V9 348 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 CDT1Q9H211 546 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 BLZF1Q9H2G9 400 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 NRDE2Q9H7Z3 1164 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 PTPRHQ9HD43 1115 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 PUF60Q9UHX1 559 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 HPSEQ9Y251 543 aa27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 COL4A4P53420 1690 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-207ENST00000397411 NR1I2O75469 434 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 FGF18O76093 207 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 CSPG5O95196 566 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 ALDH2P05091 517 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 ITGB1P05556 798 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 PPM1AP35813 382 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 SCNN1GP51170 649 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 AFF1P51825 1210 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 MRPL38Q96DV4 380 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 ST6GALNAC4Q9H4F1 302 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 EXOC7Q9UPT5 735 aa27.77■■■□□ 2.04
TSPAN4-207ENST00000397411 RECQL4O94761 1208 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 PBX3P40426 434 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 COASYQ13057 564 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 NOLC1Q14978 699 aaKnown RBP eCLIP27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 STXBP4Q6ZWJ1 553 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 ZNF280BQ86YH2 543 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 SPPL3Q8TCT6 385 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 KCNN1Q92952 543 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 HVCN1Q96D96 273 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 PAGE5Q96GU1 130 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 CCDC34Q96HJ3 373 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 ACAP3Q96P50 834 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 ACCSQ96QU6 501 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 FIZ1Q96SL8 496 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 OLFML3Q9NRN5 406 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 MIOSQ9NXC5 875 aa27.76■■■□□ 2.03
TSPAN4-207ENST00000397411 TDRD15B5MCY1 1934 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-207ENST00000397411 FRMD3A2A2Y4 597 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms