RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ATG4CQ96DT6 458 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 DYDC2Q96IM9 177 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 TRIM47Q96LD4 638 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 TAAR1Q96RJ0 339 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 FHDC1Q9C0D6 1143 aaPredicted RBP5.8□□□□□ -1.48
VPS41-203ENST00000395969 SPATC1LQ9H0A9 340 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 VTA1Q9NP79 307 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 AGPAT3Q9NRZ7 376 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 HDAC6Q9UBN7 1215 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 PNMA3Q9UL41 463 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 EXOC7Q9UPT5 735 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 COL4A6Q14031 1691 aa5.8□□□□□ -1.48
VPS41-203ENST00000395969 ENO4A6NNW6 628 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 RNF225M0QZC1 329 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 N4BP3O15049 544 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 PPP1R12BO60237 982 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 FARP2O94887 1054 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 NR3C1P04150 777 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 SLURP2P0DP57 97 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CDC25CP30307 473 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 STAT3P40763 770 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EPS15P42566 896 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 VAV2P52735 878 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 HERVK_113P62684 666 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 SF3A3Q12874 501 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS41-203ENST00000395969 E2F5Q15329 346 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CLUL1Q15846 466 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 PTGISQ16647 500 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 KLHDC7AQ5VTJ3 777 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MIS18BP1Q6P0N0 1132 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 METTL7BQ6UX53 244 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 C3orf20Q8ND61 904 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CPLX3Q8WVH0 158 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 DCPSQ96C86 337 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 ACCSQ96QU6 501 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MFRPQ9BY79 579 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 PORCNQ9H237 461 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 LARSQ9P2J5 1176 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 BCS1LQ9Y276 419 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 LUC7L2Q9Y383 392 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 KIAA1671Q9BY89 1806 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TRIM49BA6NDI0 452 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 PDE2AO00408 941 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 ABLIM1O14639 778 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ENC1O14682 589 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MGRN1O60291 552 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 SRGAP2O75044 1071 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MAFO75444 373 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 FAM107AO95990 144 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 AFPP02771 609 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 RPLP2P05387 115 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 OSBPP22059 807 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 YWHABP31946 246 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 SLC8A1P32418 973 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EPHB4P54760 987 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 NNTQ13423 1086 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 GRB14Q14449 540 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 STXBP2Q15833 593 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EMBQ6PCB8 327 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 SFR1Q86XK3 245 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CD302Q8IX05 232 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TSEN2Q8NCE0 465 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 CYP2W1Q8TAV3 490 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MYCBPAPQ8TBZ2 947 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TBC1D5Q92609 795 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 RMDN3Q96TC7 470 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 STK33Q9BYT3 514 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 BATF3Q9NR55 127 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TRIM10Q9UDY6 481 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 TPX2Q9ULW0 747 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 RIPK3Q9Y572 518 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 TSC2P49815 1807 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 GRID2IPA4D2P6 1211 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 SOWAHBA6NEL2 793 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ZBTB42B2RXF5 422 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ASAP2O43150 1006 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ATP2C2O75185 946 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 FLOT1O75955 427 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EZRP15311 586 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 CASP1P29466 404 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 EPHX2P34913 555 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 GCKP35557 465 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CYLC1P35663 651 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 CASP5P51878 434 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 CLNS1AP54105 237 aaKnown RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 CDC42EP1Q00587 391 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 UBXN1Q04323 297 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 IFFO1Q0D2I5 559 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 XRCC4Q13426 336 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 LACTB2Q53H82 288 aaPredicted RBP5.79□□□□□ -1.48
VPS41-203ENST00000395969 PADI6Q6TGC4 694 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ANO5Q75V66 913 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ARMC9Q7Z3E5 817 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 MIER3Q7Z3K6 550 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 ARMC2Q8NEN0 867 aa5.79□□□□□ -1.48
VPS41-203ENST00000395969 RNPC3Q96LT9 517 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms