RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 ATP1A1P05023 1023 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 LYNP07948 512 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 GLI1P08151 1106 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 CLK1P49759 484 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 POLR2FP61218 127 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 GALNTL6Q49A17 601 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 SLC9C2Q5TAH2 1124 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 CIAPIN1Q6FI81 312 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 SNRNP48Q6IEG0 339 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 ZBED8Q8IZ13 594 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.5□□□□□ -0.89
MSH5-205ENST00000395853 NMD3Q96D46 503 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 PSKH2Q96QS6 385 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 UQCC2Q9BRT2 126 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 CNGB3Q9NQW8 809 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 NDFIP2Q9NV92 336 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 MAP3K20Q9NYL2 800 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 TBC1D30Q9Y2I9 924 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 E9PBE3 544 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 GPAA1O43292 621 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 IDH1O75874 414 aaKnown RBP9.49□□□□□ -0.89
MSH5-205ENST00000395853 CES1P23141 567 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 ADD2P35612 726 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 PPARDQ03181 441 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 GRM1Q13255 1194 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 PUM3Q15397 648 aaKnown RBP9.49□□□□□ -0.89
MSH5-205ENST00000395853 SP8Q8IXZ3 490 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 NUP93Q8N1F7 819 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 BBS5Q8N3I7 341 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 GSDMBQ8TAX9 411 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 ZNF512BQ96KM6 892 aaPredicted RBP9.49□□□□□ -0.89
MSH5-205ENST00000395853 FAM114A2Q9NRY5 505 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 IP6K2Q9UHH9 426 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 MROH5Q6ZUA9 1318 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 CASP8AP2Q9UKL3 1982 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 SMIM31A0A1B0GVY4 71 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 GOLGA8CPA6NN73 597 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 KMOO15229 486 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 B4GALT4O60513 344 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 TMCC2O75069 709 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 ZCCHC18P0CG32 403 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 CHRNB1P11230 501 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 PTPN2P17706 415 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 KRT4P19013 534 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 GMPSP49915 693 aaPredicted RBP9.49□□□□□ -0.89
MSH5-205ENST00000395853 DR1Q01658 176 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 CCDC81Q6ZN84 652 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
MSH5-205ENST00000395853 CEP70Q8NHQ1 597 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 MED30Q96HR3 178 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 STK33Q9BYT3 514 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 SNX25Q9H3E2 840 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 SELENONQ9NZV5 590 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 EXOC7Q9UPT5 735 aa9.49□□□□□ -0.89
MSH5-205ENST00000395853 ANKRD34BA5PLL1 514 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 H3BQV1 296 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 PDE2AO00408 941 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 CTNND1O60716 968 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 CTDNEP1O95476 244 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 EIF2S1P05198 315 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 ITGA9Q13797 1035 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 AOC3Q16853 763 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ERMARDQ5T6L9 678 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ST13P4Q8IZP2 240 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 OR7G1Q8NGA0 311 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ANKRD49Q8WVL7 239 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 SNF8Q96H20 258 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 PBKQ96KB5 322 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 AGXT2Q9BYV1 514 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 NCOA5Q9HCD5 579 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 VTA1Q9NP79 307 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 MOSPD1Q9UJG1 213 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ARAP2Q8WZ64 1704 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 CHKAP35790 457 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ETFBP38117 255 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 AP3M2P53677 418 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 RAB15P59190 212 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 NAA20P61599 178 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 SEPT6Q14141 434 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 BBS9Q3SYG4 887 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 C1orf228Q6PIY5 440 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 RFPL4BQ6ZWI9 263 aa9.48□□□□□ -0.89
MSH5-205ENST00000395853 FASTKD5Q7L8L6 764 aaKnown RBP9.48□□□□□ -0.89
MSH5-205ENST00000395853 ARHGAP24Q8N264 748 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms