RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GPC5P78333 572 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 NPY5RQ15761 445 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 RSPO4Q2I0M5 234 aaPredicted RBP17.67■□□□□ 0.42
SNCA-205ENST00000394991 BMP2KLQ5H9B9 411 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 MOXD1Q6UVY6 613 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 FGF14Q92915 247 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 KCNB2Q92953 911 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 CPB2Q96IY4 423 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
SNCA-205ENST00000394991 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 C22orf23Q9BZE7 217 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 FNIP2Q9P278 1114 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 ZMYND10O75800 440 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 RFC5P40937 340 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 CCT2P78371 535 aaKnown RBP17.66■□□□□ 0.42
SNCA-205ENST00000394991 PPP2R5CQ13362 524 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 EMC2Q15006 297 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 PARM1Q6UWI2 310 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 GSTCDQ8NEC7 633 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
SNCA-205ENST00000394991 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
SNCA-205ENST00000394991 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
SNCA-205ENST00000394991 KINO60870 393 aaKnown RBP17.65■□□□□ 0.42
SNCA-205ENST00000394991 ERLIN2O94905 339 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 FSHRP23945 695 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 NTHL1P78549 312 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 BLIDQ8IZY5 108 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 RABGGTAQ92696 567 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 CNTNAP3BQ96NU0 1288 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 DDX23Q9BUQ8 820 aaKnown RBP17.65■□□□□ 0.42
SNCA-205ENST00000394991 COLEC11Q9BWP8 271 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 CNTNAP3Q9BZ76 1288 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
SNCA-205ENST00000394991 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNCA-205ENST00000394991 CACNG4Q9UBN1 327 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 FBXW11Q9UKB1 542 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 PPME1Q9Y570 386 aa17.65■□□□□ 0.42
SNCA-205ENST00000394991 ZBTB39O15060 712 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 KRT37O76014 449 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 P4HBP07237 508 aaKnown RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 PDIA3P30101 505 aaKnown RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 PTENP60484 403 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 SNW1Q13573 536 aaKnown RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 AMHR2Q16671 573 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 INF2Q27J81 1249 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 USP41Q3LFD5 358 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 RTP2Q5QGT7 225 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 NOTUMQ6P988 496 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 PRSS55Q6UWB4 352 aaPredicted RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 GRASPQ7Z6J2 395 aaPredicted RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 GPR65Q8IYL9 337 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 DAGLBQ8NCG7 672 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 TCP11Q8WWU5 503 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 CCDC51Q96ER9 411 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 LXNQ9BS40 222 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 CSRNP2Q9H175 543 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 KCNMB3Q9NPA1 279 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 XPNPEP1Q9NQW7 623 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 ADAM28Q9UKQ2 775 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 CDH7Q9ULB5 785 aa17.64■□□□□ 0.41
SNCA-205ENST00000394991 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
SNCA-205ENST00000394991 TRIP11Q15643 1979 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 KANSL1LA0AUZ9 987 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 ASAP2O43150 1006 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 DKC1O60832 514 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNCA-205ENST00000394991 AXLP30530 894 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 YWHABP31946 246 aaKnown RBP17.63■□□□□ 0.41
SNCA-205ENST00000394991 EVCP57679 992 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
SNCA-205ENST00000394991 MLF2Q15773 248 aaPredicted RBP17.63■□□□□ 0.41
SNCA-205ENST00000394991 ZNF528Q3MIS6 628 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 C4orf19Q8IY42 314 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 EXOC8Q8IYI6 725 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 SHDQ96IW2 340 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 AIFM3Q96NN9 605 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 SPATA6Q9NWH7 488 aaPredicted RBP17.63■□□□□ 0.41
SNCA-205ENST00000394991 RGL1Q9NZL6 768 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 GIT1Q9Y2X7 761 aa17.63■□□□□ 0.41
SNCA-205ENST00000394991 ZFP37Q9Y6Q3 630 aaPredicted RBP17.63■□□□□ 0.41
SNCA-205ENST00000394991 NR1I2O75469 434 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 ARF4P18085 180 aaPredicted RBP17.62■□□□□ 0.41
SNCA-205ENST00000394991 AKAP5P24588 427 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 MBTD1Q05BQ5 628 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 VARS2Q5ST30 1063 aaKnown RBP17.62■□□□□ 0.41
SNCA-205ENST00000394991 CDR2LQ86X02 465 aaPredicted RBP17.62■□□□□ 0.41
SNCA-205ENST00000394991 IFNLR1Q8IU57 520 aaPredicted RBP17.62■□□□□ 0.41
SNCA-205ENST00000394991 ASAP3Q8TDY4 903 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 FAM20AQ96MK3 541 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 MTRQ99707 1265 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 PAAF1Q9BRP4 392 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 NCDNQ9UBB6 729 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 FBXO4Q9UKT5 387 aa17.62■□□□□ 0.41
SNCA-205ENST00000394991 INO80B-WBP1J3KQ70 363 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms