RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TRIM49P0CI25 452 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 TRIM49CP0CI26 452 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 PPM1NQ8N819 430 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 APPL2Q8NEU8 664 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 NRBF2Q96F24 287 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 TRIM45Q9H8W5 580 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 LAMC1P11047 1609 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 CFAP69A5D8W1 941 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 DCTN3O75935 186 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 GH1P01241 217 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 C12orf60Q5U649 245 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 EPM2AIP1Q7L775 607 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-203ENST00000394872 CCNYL1Q8N7R7 359 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 CEP19Q96LK0 163 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 TRIM54Q9BYV2 358 aa11.02□□□□□ -0.65
COL4A6-203ENST00000394872 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 E2F6O75461 281 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 EYA4O95677 639 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 GGPS1O95749 300 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CEP55Q53EZ4 464 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 RAB42Q8N4Z0 105 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 SYNDIG1Q9H7V2 258 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 PLEKHA5Q9HAU0 1116 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TEKT2Q9UIF3 430 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CYP2B6P20813 491 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TAP1Q03518 808 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TKFCQ3LXA3 575 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ANGEL2Q5VTE6 544 aaKnown RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 POLR3CQ9BUI4 534 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CDH6P55285 790 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 BAATQ14032 418 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 EMBQ6PCB8 327 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 RHOT1Q8IXI2 618 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 DAGLAQ9Y4D2 1042 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TMEM143Q96AN5 459 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 DCUN1D1Q96GG9 259 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TEX12Q9BXU0 123 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TEX13BQ9BXU2 312 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 WNT8AQ9H1J5 351 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF521Q96K83 1311 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 FAM95CA0A1B0GW59 222 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 MYO1DO94832 1006 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 LPAR1Q92633 364 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 LSM7Q9UK45 103 aaKnown RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 RRP15Q9Y3B9 282 aaKnown RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 GLI2P10070 1586 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 KIF28PB7ZC32 967 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ASAP2O43150 1006 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ASMTLO95671 621 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TPI1P60174 286 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 MDM2Q00987 491 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 HIPK4Q8NE63 616 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TEKT4Q8WW24 435 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CYTH2Q99418 400 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ELAC2Q9BQ52 826 aaKnown RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ACTR5Q9H9F9 607 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 CASS4Q9NQ75 786 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 TRIM33Q9UPN9 1127 aa11.01□□□□□ -0.65
COL4A6-203ENST00000394872 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-203ENST00000394872 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 FLT1P17948 1338 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 KRT14P02533 472 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 MMEP08473 750 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PEX19P40855 299 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 VCPP55072 806 aaKnown RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 ST8SIA6P61647 398 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 IER5Q5VY09 327 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 KDELC2Q7Z4H8 507 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 EPAS1Q99814 870 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PYGBP11216 843 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 EEF1DP29692 281 aaKnown RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 NMT1P30419 496 aaKnown RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 TAF11Q15544 211 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 GRAMD1BQ3KR37 738 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PGBD3Q8N328 593 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 EFHBQ8N7U6 833 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 A0A087WUV0 522 aaPredicted RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 RARBP10826 455 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 HSD17B4P51659 736 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 CLCN6P51797 869 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 PDIA2Q13087 525 aaKnown RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
COL4A6-203ENST00000394872 SLC26A7Q8TE54 656 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 TIPINQ9BVW5 301 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 GGA3Q9NZ52 723 aa11□□□□□ -0.65
COL4A6-203ENST00000394872 BFARQ9NZS9 450 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms