RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 INO80B-WBP1J3KQ70 363 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 NFKBIEO00221 500 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PDXKO00764 312 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PLA2G6O60733 806 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MUTP22033 750 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MARK3P27448 753 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 OAZ1P54368 228 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CCL15Q16663 113 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 HSP90AA5PQ58FG0 334 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD20A8PQ5CZ79 823 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SLFN12LQ6IEE8 588 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ZNF449Q6P9G9 518 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CYFIP1Q7L576 1253 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 KSR1Q8IVT5 923 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ST13P4Q8IZP2 240 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 KIF2BQ8N4N8 673 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 GPRC5AQ8NFJ5 357 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 RDM1Q8NG50 284 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 TRPM4Q8TD43 1214 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SNRNP27Q8WVK2 155 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 UPF1Q92900 1129 aaKnown RBP eCLIP6.08□□□□□ -1.449e-7■■■■□ 26.6
RFFL-202ENST00000394597 REEP2Q9BRK0 252 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SYT17Q9BSW7 474 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MOV10L1Q9BXT6 1211 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 INO80BQ9C086 356 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 RAB17Q9H0T7 212 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ANKFY1Q9P2R3 1169 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 RGS17Q9UGC6 210 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PLIN4Q96Q06 1357 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PAPPAQ13219 1627 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 NHSQ6T4R5 1651 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 TMEM110-MUSTN1A8MSY1 372 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SLC16A4O15374 487 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MED24O75448 989 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CELF2O95319 508 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 TNNC2P02585 160 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 KRT19P08727 400 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SRGAP2CP0DJJ0 459 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PPATQ06203 517 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 XKR3Q5GH77 459 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PCNX4Q63HM2 1172 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 DPH6Q7L8W6 267 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 SPATA21Q7Z572 469 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 XXYLT1Q8NBI6 393 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 U2AF1L4Q8WU68 220 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MTMR9Q96QG7 549 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MTRQ99707 1265 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 GLIS2Q9BZE0 524 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 UNC45AQ9H3U1 944 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.08□□□□□ -1.44
RFFL-202ENST00000394597 RNF14Q9UBS8 474 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 NRAPQ86VF7 1730 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 A0A1B0GTH6 734 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 A0A1W2PQC6 194 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZNF189O75820 626 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 CYP3A4P08684 503 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 SARSP49591 514 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 STAT5BP51692 787 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GTF2A2P52657 109 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 MFAP3P55082 362 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 YWHAEP62258 255 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 KCNH2Q12809 1159 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NR1I3Q14994 352 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ARHGEF6Q15052 776 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 LIN9Q5TKA1 542 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 TRPM8Q7Z2W7 1104 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 CFAP61Q8NHU2 1237 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GSDMBQ8TAX9 411 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 SEPT1Q8WYJ6 367 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 SPATA33Q96N06 139 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NT5C1BQ96P26 610 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 PARK7Q99497 189 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 NHEJ1Q9H9Q4 299 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 SLC38A10Q9HBR0 1119 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 C1orf112Q9NSG2 853 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZNF233A6NK53 670 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 PIK3CDO00329 1044 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 IGF2BP3O00425 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFFL-202ENST00000394597 MEIS2O14770 477 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 OPLAHO14841 1288 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 DGAT1O75907 488 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 GGPS1O95749 300 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 LDHAP00338 332 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 TXNP10599 105 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZFXP17010 805 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 TAL1P17542 331 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 CYP11B2P19099 503 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 KCNA3P22001 575 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 NMT1P30419 496 aaKnown RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 SLCO1A2P46721 670 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FXR1P51114 621 aaKnown RBP eCLIP6.07□□□□□ -1.44
RFFL-202ENST00000394597 ZNF157P51786 506 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 SHROOM1Q2M3G4 852 aaPredicted RBP6.07□□□□□ -1.44
RFFL-202ENST00000394597 SLC44A4Q53GD3 710 aa6.07□□□□□ -1.44
RFFL-202ENST00000394597 FAM47CQ5HY64 1035 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms