RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ATMINO43313 823 aaPredicted RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 CUTAO60888 179 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 FGF18O76093 207 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 BRD1O95696 1058 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 EDN1P05305 212 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 KRT18P05783 430 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 ZNF131P52739 623 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 RNASELQ05823 741 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 NT5DC1Q5TFE4 455 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 RRAGBQ5VZM2 374 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 KCNT2Q6UVM3 1135 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.41□□□□□ -0.9
APLF-202ENST00000394342 THNSL1Q8IYQ7 743 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 POF1BQ8WVV4 589 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 KCNN1Q92952 543 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 REEP2Q9BRK0 252 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 NXF3Q9H4D5 531 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 NSUN3Q9H649 340 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 PARVGQ9HBI0 331 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 ALG13Q9NP73 1137 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 SPG21Q9NZD8 308 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 LARSQ9P2J5 1176 aaKnown RBP9.41□□□□□ -0.9
APLF-202ENST00000394342 THEGQ9P2T0 379 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 COG5Q9UP83 839 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
APLF-202ENST00000394342 ARL5CA6NH57 179 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 SFI1A8K8P3 1242 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 TULP1O00294 542 aaPredicted RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 SLC16A4O15374 487 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 NCK2O43639 380 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ZC3H11AO75152 810 aaKnown RBP eCLIP9.4□□□□□ -0.9
APLF-202ENST00000394342 TBCAO75347 108 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 FAM13AO94988 1023 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 LIG1P18858 919 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 DNAJB1P25685 340 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ABCD1P33897 745 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 STAT6P42226 847 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ALDH7A1P49419 539 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 BCAR1P56945 870 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 KRT17Q04695 432 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 STRN3Q13033 797 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 CAMK1Q14012 370 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 GIT2Q14161 759 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 DHX8Q14562 1220 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 FOXD4L6Q3SYB3 417 aaPredicted RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 TCEAL5Q5H9L2 206 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 FOXD4L3Q6VB84 417 aaPredicted RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 SV2BQ7L1I2 683 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 TAS1R3Q7RTX0 852 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 CDR2LQ86X02 465 aaPredicted RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 SLC39A11Q8N1S5 342 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ATXN2LQ8WWM7 1075 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 PPP2R3CQ969Q6 453 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 FAM193BQ96PV7 902 aaPredicted RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 ACO2Q99798 780 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 TMEM175Q9BSA9 504 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 APOL6Q9BWW8 343 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 NRDE2Q9H7Z3 1164 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 PUF60Q9UHX1 559 aaKnown RBP9.4□□□□□ -0.9
APLF-202ENST00000394342 TNFSF13BQ9Y275 285 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ZDHHC9Q9Y397 364 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 HES2Q9Y543 173 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
APLF-202ENST00000394342 DOCK8Q8NF50 2099 aa9.4□□□□□ -0.91
APLF-202ENST00000394342 DENND4AQ7Z401 1863 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 FSCN2O14926 492 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 POMCP01189 267 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 GALTP07902 379 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 PROZP22891 400 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 MLH1P40692 756 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 ME1P48163 572 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 AAK1Q2M2I8 961 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 AXDND1Q5T1B0 1012 aaPredicted RBP9.39□□□□□ -0.91
APLF-202ENST00000394342 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 MYCT1Q8N699 235 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 HLA-CQ95604 372 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 RPS6KC1Q96S38 1066 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 GAD1Q99259 594 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 SNTG2Q9NY99 539 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 STK39Q9UEW8 545 aa9.39□□□□□ -0.91
APLF-202ENST00000394342 RCOR1Q9UKL0 485 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms