RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 SLC17A8Q8NDX2 589 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 GBP5Q96PP8 586 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 MTRF1LQ9UGC7 380 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 RIPK2O43353 540 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 HNRNPCL1O60812 293 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 KCNA3P22001 575 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 POLR2FP61218 127 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 COASYQ13057 564 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 DNAJC19Q96DA6 116 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 NR1H4Q96RI1 486 aaPredicted RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 DDX23Q9BUQ8 820 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 COMMD3-BMI1R4GMX3 469 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 TMEM120BA0PK00 339 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 USP17L10C9JJH3 530 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 RARGP13631 454 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 POLGP54098 1239 aaPredicted RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 VSTM1Q6UX27 236 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 SERPINB12Q96P63 405 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 SLC16A2P36021 539 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 FAM26FQ5R3K3 315 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 GPIHBP1Q8IV16 184 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 LRRC8CQ8TDW0 803 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 TEKT1Q969V4 418 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 GRHL1Q9NZI5 618 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 ATF5Q9Y2D1 282 aaPredicted RBP20.19■□□□□ 0.82
HOXC6-202ENST00000394331 RAPGEF1Q13905 1077 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 RCN2Q14257 317 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 LRRC41Q15345 812 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 CDC42EP5Q6NZY7 148 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 FBXO25Q8TCJ0 367 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 ZNF510Q9Y2H8 683 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 COL4A3BPQ9Y5P4 624 aa20.19■□□□□ 0.82
HOXC6-202ENST00000394331 MARSP56192 900 aaKnown RBP20.18■□□□□ 0.82
HOXC6-202ENST00000394331 ECM1Q16610 540 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 DBN1Q16643 649 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 CEP63Q96MT8 703 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 MYLK2Q9H1R3 596 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 GNA14O95837 355 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 MAPK7Q13164 816 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 KCTD1Q719H9 257 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 JAMLQ86YT9 394 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 TGS1Q96RS0 853 aaKnown RBP20.18■□□□□ 0.82
HOXC6-202ENST00000394331 IWS1Q96ST2 819 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 TBC1D10AQ9BXI6 508 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 TRIM31Q9BZY9 425 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 TANGO6Q9C0B7 1094 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 GANQ9H2C0 597 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 SEMA4AQ9H3S1 761 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 GALNT8Q9NY28 637 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
HOXC6-202ENST00000394331 ATP9AO75110 1047 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 FGGP02679 453 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 PLTPP55058 493 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 LSAMPQ13449 338 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 ZNF568Q3ZCX4 644 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 SLC7A6OSQ96CW6 309 aaPredicted RBP20.17■□□□□ 0.82
HOXC6-202ENST00000394331 SPATA16Q9BXB7 569 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 CARD9Q9H257 536 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 LTBP1Q14766 1721 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 SMIM23A6NLE4 172 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 TRAF5O00463 557 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 CCDC166P0CW27 439 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 CNPY1Q3B7I2 92 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 VSIG1Q86XK7 387 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 DENND2DQ9H6A0 471 aaPredicted RBP20.17■□□□□ 0.82
HOXC6-202ENST00000394331 STARD13Q9Y3M8 1113 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 LRRC37AA6NMS7 1700 aa20.17■□□□□ 0.82
HOXC6-202ENST00000394331 DCTN3O75935 186 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 SERPINB4P48594 390 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 SCNN1DP51172 638 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 LRRC14Q15048 493 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 SH2D4BQ5SQS7 431 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 TRMT10CQ7L0Y3 403 aaKnown RBP20.16■□□□□ 0.82
HOXC6-202ENST00000394331 FAM133AQ8N9E0 248 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 ARHGEF2Q92974 986 aaKnown RBP20.16■□□□□ 0.82
HOXC6-202ENST00000394331 PPP1R14BQ96C90 147 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 MIS12Q9H081 205 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 METTL14Q9HCE5 456 aaKnown RBP20.16■□□□□ 0.82
HOXC6-202ENST00000394331 DDX43Q9NXZ2 648 aaKnown RBP20.16■□□□□ 0.82
HOXC6-202ENST00000394331 LNPEPQ9UIQ6 1025 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 USH1CQ9Y6N9 552 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 G3V3G9 751 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 PODXLO00592 558 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 DESP17661 470 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 PRKCIP41743 596 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 APOBEC3HQ6NTF7 200 aaKnown RBP20.16■□□□□ 0.82
HOXC6-202ENST00000394331 SYCP3Q8IZU3 236 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 GLIS3Q8NEA6 775 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 CCDC113Q9H0I3 377 aa20.16■□□□□ 0.82
HOXC6-202ENST00000394331 IL1RAPL1Q9NZN1 696 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms