RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 PCDHA1Q9Y5I3 950 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
SFXN3-202ENST00000393459 CFAP69A5D8W1 941 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 FAM13AO94988 1023 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 GJB6O95452 261 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 PYGLP06737 847 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 PTDSS1P48651 473 aaKnown RBP15.57■□□□□ 0.08
SFXN3-202ENST00000393459 ITGA8P53708 1063 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 SMAD1Q15797 465 aaKnown RBP15.57■□□□□ 0.08
SFXN3-202ENST00000393459 SLC10A5Q5PT55 438 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 FBXO33Q7Z6M2 555 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 MAB21L3Q8N8X9 362 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 SLC5A5Q92911 643 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 SH3GL3Q99963 347 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 UBN1Q9NPG3 1134 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 PCDHA2Q9Y5H9 948 aa15.57■□□□□ 0.08
SFXN3-202ENST00000393459 BTAF1O14981 1849 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 GNPATO15228 680 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-202ENST00000393459 CALRP27797 417 aaKnown RBP15.56■□□□□ 0.08
SFXN3-202ENST00000393459 SGSM1Q2NKQ1 1148 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 TMEM119Q4V9L6 283 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 PPP1R15BQ5SWA1 713 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 CDCA2Q69YH5 1023 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-202ENST00000393459 GALNT17Q6IS24 598 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 CERKQ8TCT0 537 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 PGM2Q96G03 612 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 SETDB2Q96T68 719 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 EDEM3Q9BZQ6 932 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 CYP26A1O43174 497 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 PHF2O75151 1096 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 GNA14O95837 355 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 GYS1P13807 737 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 VCAM1P19320 739 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.08
SFXN3-202ENST00000393459 SETDB1Q15047 1291 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 RBBP5Q15291 538 aaKnown RBP15.56■□□□□ 0.08
SFXN3-202ENST00000393459 PPP1R18Q6NYC8 613 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 RASGEF1CQ8N431 466 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 FAM13CQ8NE31 585 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 LRRC37BQ96QE4 947 aa15.56■□□□□ 0.08
SFXN3-202ENST00000393459 SCN7AQ01118 1682 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 SGPL1O95470 568 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 ZSCAN5DPP0CG00 497 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 UBL4BQ8N7F7 174 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 SPZ1Q9BXG8 430 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 TBC1D10AQ9BXI6 508 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 NAALADL1Q9UQQ1 740 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 ASTN1O14525 1302 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 PI4K2BG5E9Z4 385 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 ECEL1O95672 775 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 EEF2P13639 858 aaKnown RBP15.55■□□□□ 0.08
SFXN3-202ENST00000393459 PTGIRP43119 386 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 RRP1BQ14684 758 aaKnown RBP15.55■□□□□ 0.08
SFXN3-202ENST00000393459 ARHGEF19Q8IW93 802 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 JDP2Q8WYK2 163 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 DHX38Q92620 1227 aaKnown RBP15.55■□□□□ 0.08
SFXN3-202ENST00000393459 PRR11Q96HE9 360 aaPredicted RBP15.55■□□□□ 0.08
SFXN3-202ENST00000393459 DYDC2Q96IM9 177 aa15.55■□□□□ 0.08
SFXN3-202ENST00000393459 IFNB1P01574 187 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 FERP16591 822 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 COILP38432 576 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 PAPOLAP51003 745 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 BLMHQ13867 455 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 CERKLQ49MI3 558 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 TAF1BQ53T94 588 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 EPM2AIP1Q7L775 607 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 SLC25A41Q8N5S1 370 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 HERPUD2Q9BSE4 406 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 CALUO43852 315 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 SNUPNO95149 360 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 NUDT17P0C025 328 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 PCP11498 1178 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ETS1P14921 441 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 CA4P22748 312 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 GBP1P32455 592 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 DSTYKQ6XUX3 929 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 MTDHQ86UE4 582 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 SLC47A2Q86VL8 602 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 MAGEC3Q8TD91 643 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 NUP85Q9BW27 656 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 TXLNGYQ9BZA5 131 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 DENND2DQ9H6A0 471 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 VPS37BQ9H9H4 285 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 KCNMB3Q9NPA1 279 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 TRPC5Q9UL62 973 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 R3HDM2Q9Y2K5 976 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 USP20Q9Y2K6 914 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 BZW2Q9Y6E2 419 aaKnown RBP15.54■□□□□ 0.08
SFXN3-202ENST00000393459 TMEM150BA6NC51 233 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 EML1O00423 815 aa15.54■□□□□ 0.08
SFXN3-202ENST00000393459 ZBED4O75132 1171 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms