RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 AGO2Q9UKV8 859 aaKnown RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 PLXNA1Q9UIW2 1896 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 IGKV6-21A0A0C4DH24 114 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 RBM47A0AV96 593 aaKnown RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 GTPBP10A4D1E9 387 aaKnown RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 F8VZ95 297 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 ATP1A1P05023 1023 aaKnown RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 SLC10A3P09131 477 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MXI1P50539 228 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 PTPROQ16827 1216 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 OLFML2BQ68BL8 750 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 OR6J1Q8NGC5 347 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
MKS1-202ENST00000393119 IQCDQ96DY2 449 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 ERAP1Q9NZ08 941 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MSCO60682 206 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 C22orf31O95567 290 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 H2AFXP16104 143 aaPredicted RBP16.22■□□□□ 0.19
MKS1-202ENST00000393119 TMEM62Q0P6H9 643 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 CEP120Q8N960 986 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 PPTC7Q8NI37 304 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 MANSC4A6NHS7 340 aaPredicted RBP16.22■□□□□ 0.19
MKS1-202ENST00000393119 LCA5LO95447 670 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 USP8P40818 1118 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 MAP2K5Q13163 448 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 SPOPLQ6IQ16 392 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 SLC17A8Q8NDX2 589 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 SLC20A1Q8WUM9 679 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 PSPC1Q8WXF1 523 aaKnown RBP16.22■□□□□ 0.19
MKS1-202ENST00000393119 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
MKS1-202ENST00000393119 HVCN1Q96D96 273 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 FAM167AQ96KS9 214 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 KREMEN1Q96MU8 473 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
MKS1-202ENST00000393119 SLC15A5A6NIM6 579 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 H3BRB1 525 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 INO80B-WBP1J3KQ70 363 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 HBP1O60381 514 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 MMP3P08254 477 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 FGFR4P22455 802 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 BEX3Q00994 111 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 HIC1Q14526 733 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 ERCC6LQ2NKX8 1250 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 IER5Q5VY09 327 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 EEF1DP3Q658K8 133 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 TMEM192Q8IY95 271 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 LNX1Q8TBB1 728 aaPredicted RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 FAM212AQ96EL1 285 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 PSMB7Q99436 277 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 TCHPQ9BT92 498 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 INO80BQ9C086 356 aaPredicted RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 CCDC113Q9H0I3 377 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 GOLPH3Q9H4A6 298 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 SETD4Q9NVD3 440 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 DDX3XO00571 662 aaKnown RBP eCLIP16.21■□□□□ 0.196e-6■□□□□ 8.9
MKS1-202ENST00000393119 SLU7O95391 586 aaKnown RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 KIF5AQ12840 1032 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 MARCH8Q5T0T0 291 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 ZNF467Q7Z7K2 595 aaPredicted RBP16.21■□□□□ 0.19
MKS1-202ENST00000393119 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 OR5B17Q8NGF7 314 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 MRFAP1Q9Y605 127 aa16.21■□□□□ 0.19
MKS1-202ENST00000393119 A0A087WZ62 844 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 NCK2O43639 380 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 EXTL3O43909 919 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 AOC2O75106 756 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 GARTP22102 1010 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 SOX5P35711 763 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 ELF2Q15723 593 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 SLC18A3Q16572 532 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 FDXACB1Q9BRP7 624 aaPredicted RBP16.2■□□□□ 0.18
MKS1-202ENST00000393119 CHORDC1Q9UHD1 332 aaPredicted RBP16.2■□□□□ 0.18
MKS1-202ENST00000393119 GJD2Q9UKL4 321 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 A0A0B4J269 797 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 ZNF185O15231 689 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 PRKCBP05771 671 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
MKS1-202ENST00000393119 TNNI1P19237 187 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 STYXL1Q9Y6J8 313 aa16.2■□□□□ 0.18
MKS1-202ENST00000393119 TLL2Q9Y6L7 1015 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms