RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 PABPC3Q9H361 631 aaKnown RBP16.16■□□□□ 0.18
SHTN1-204ENST00000392903 INTS9Q9NV88 658 aaKnown RBP16.16■□□□□ 0.18
SHTN1-204ENST00000392903 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
SHTN1-204ENST00000392903 RGPD3A6NKT7 1758 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 RGPD4Q7Z3J3 1758 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 FAM170AA1A519 330 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 UBOX5O94941 541 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 OAS1P00973 400 aaKnown RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 ZNF571Q7Z3V5 609 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 GBP7Q8N8V2 638 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 MICAL1Q8TDZ2 1067 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 CLEC4DQ8WXI8 215 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 CELF4Q9BZC1 486 aaKnown RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 RAB17Q9H0T7 212 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 TTC7AQ9ULT0 858 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 MYH11P35749 1972 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 ARHGEF35A5YM69 484 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 LUC7L3O95232 432 aaKnown RBP16.15■□□□□ 0.18
SHTN1-204ENST00000392903 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 SHBGP04278 402 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 HSD17B4P51659 736 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 PEX26Q7Z412 305 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 FAM186BQ8IYM0 893 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 ZDHHC18Q9NUE0 388 aa16.15■□□□□ 0.18
SHTN1-204ENST00000392903 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 SNX3O60493 162 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 FLOT1O75955 427 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 AGTP01019 485 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 VIMP08670 466 aaKnown RBP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 PEX19P40855 299 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 MIER3Q7Z3K6 550 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 ANKRD27Q96NW4 1050 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 PRMT1Q99873 361 aaKnown RBP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 ECT2Q9H8V3 914 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 BZW2Q9Y6E2 419 aaKnown RBP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 TMEM150BA6NC51 233 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 EIF3DO15371 548 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 HIP1RO75146 1068 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
SHTN1-204ENST00000392903 PDE6CP51160 858 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 B3GNT9Q6UX72 402 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 TEPSINQ96N21 525 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 SIX2Q9NPC8 291 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
SHTN1-204ENST00000392903 A0A0A6YYK5 440 aaPredicted RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 A6NHS1 94 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 IGF2BP3O00425 579 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 SLC16A3O15427 465 aaKnown RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 RGS16O15492 202 aaPredicted RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 PMS2P54278 862 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 PTPROQ16827 1216 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 DUPD1Q68J44 220 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 PADI6Q6TGC4 694 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 SYCP3Q8IZU3 236 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 SYCE1Q8N0S2 351 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 HES6Q96HZ4 224 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 RIT2Q99578 217 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 ARHGEF3Q9NR81 526 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 FZD1Q9UP38 647 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 BCS1LQ9Y276 419 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 RBBP6Q7Z6E9 1792 aaKnown RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TRIM49P0CI25 452 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TRIM49CP0CI26 452 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 ANXA13P27216 316 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 PTENP60484 403 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 COPS2P61201 443 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 BNIP1Q12981 228 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 MTMR2Q13614 643 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
SHTN1-204ENST00000392903 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 HS2ST1Q7LGA3 356 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 NT5DC3Q86UY8 548 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 DAW1Q8N136 415 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TRIM51Q9BSJ1 452 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 NENFQ9UMX5 172 aa16.13■□□□□ 0.17
SHTN1-204ENST00000392903 TISP43B9A030 160 aa16.12■□□□□ 0.17
SHTN1-204ENST00000392903 NPEPPSP55786 919 aa16.12■□□□□ 0.17
SHTN1-204ENST00000392903 RWDD2BP57060 319 aa16.12■□□□□ 0.17
SHTN1-204ENST00000392903 RPS6P62753 249 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms