RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 HINFPQ9BQA5 517 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 GANQ9H2C0 597 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 FLRT1Q9NZU1 646 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 TRAF3IP3Q9Y228 551 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 ZMYM2Q9UBW7 1377 aa21.52■■□□□ 1.04
CSNK1D-203ENST00000392334 IGKV6D-21A0A0A0MT36 114 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 PDXKO00764 312 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 ADCYAP1R1P41586 468 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 NOP2P46087 812 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 CCL14Q16627 93 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 EDRF1Q3B7T1 1238 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 TTC31Q49AM3 519 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 C10orf76Q5T2E6 689 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 TAPT1Q6NXT6 567 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 KCNV1Q6PIU1 500 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 EIF1ADQ8N9N8 165 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 ARL8AQ96BM9 186 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 MS4A14Q96JA4 679 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 TYW1Q9NV66 732 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 ZNF236Q9UL36 1845 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 PCDHB13Q9Y5F0 798 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 ATP8B3O60423 1300 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 CETN3O15182 167 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 EIF3DO15371 548 aaKnown RBP eCLIP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 CALUO43852 315 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 GLI1P08151 1106 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 KLRC1P26715 233 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 NAP1L1P55209 391 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 GNGT1P63211 74 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 SYCP3Q8IZU3 236 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 BSNDQ8WZ55 320 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 USP6NLQ92738 828 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 XPNPEP1Q9NQW7 623 aa21.51■■□□□ 1.03
CSNK1D-203ENST00000392334 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 TISP43B9A030 160 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 EBAG9O00559 213 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 HEXIM1O94992 359 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 NR3C1P04150 777 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 CASP4P49662 377 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 ZNF467Q7Z7K2 595 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 WHAMMQ8TF30 809 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 TINF2Q9BSI4 451 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 AZI2Q9H6S1 392 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 DIS3Q9Y2L1 958 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 DGAT1O75907 488 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 CARSP49589 748 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 POLGP54098 1239 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 MRPS25P82663 173 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 SP3Q02447 781 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 HAUS6Q7Z4H7 955 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 TMEM143Q96AN5 459 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 TMEM59LQ9UK28 342 aa21.5■■□□□ 1.03
CSNK1D-203ENST00000392334 ATXN2Q99700 1313 aaKnown RBP21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 WDR81Q562E7 1941 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 NPTX2P47972 431 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 CCT5P48643 541 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 ASIC2Q16515 512 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 CFAP58Q5T655 872 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 FAM160B1Q5W0V3 765 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 STXBP4Q6ZWJ1 553 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 TADA2BQ86TJ2 420 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 BCAS4Q8TDM0 211 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 EPB41L5Q9HCM4 733 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 GABRQQ9UN88 632 aa21.49■■□□□ 1.03
CSNK1D-203ENST00000392334 A0A087X0T9 212 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 LOC102724159A0A0B4J2E5 919 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 ZEB2O60315 1214 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PPP1R37O75864 691 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 AKAP3O75969 853 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 FAM228BP0C875 321 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 FCGRTP55899 365 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 KLHL30Q0D2K2 578 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PWP2Q15269 919 aaKnown RBP21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PRAMEF19Q5SWL8 479 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 KDM7AQ6ZMT4 941 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PACS2Q86VP3 889 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 GPIHBP1Q8IV16 184 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 STRA6Q9BX79 667 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 KATNBL1Q9H079 304 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 ATP6V0A4Q9HBG4 840 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PLCB1Q9NQ66 1216 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 PDLIM7Q9NR12 457 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 MYH11P35749 1972 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 LOXHD1Q8IVV2 1947 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 HOXC6P09630 235 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 CYP2J2P51589 502 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 TNNC1P63316 161 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 GUCY2DQ02846 1103 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 DMP1Q13316 513 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 RAPGEF1Q13905 1077 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 EMC2Q15006 297 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 TIPINQ9BVW5 301 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
CSNK1D-203ENST00000392334 NFU1Q9UMS0 254 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms