RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 GRB14Q14449 540 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 CDCA2Q69YH5 1023 aaPredicted RBP27.26■■□□□ 1.95
SHOX2-201ENST00000389589 H2AFVQ71UI9 128 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 EMID1Q96A84 441 aaPredicted RBP27.26■■□□□ 1.95
SHOX2-201ENST00000389589 C2orf40Q9H1Z8 148 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 SUGCTQ9HAC7 445 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 RAB20Q9NX57 234 aa27.26■■□□□ 1.95
SHOX2-201ENST00000389589 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.26■■□□□ 1.95
SHOX2-201ENST00000389589 TCP1P17987 556 aaKnown RBP27.25■■□□□ 1.95
SHOX2-201ENST00000389589 MAPK4P31152 587 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 LAMTOR4Q0VGL1 99 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 DRP2Q13474 957 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 SV2AQ7L0J3 742 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 DPP9Q86TI2 863 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 ZBTB8OSQ8IWT0 167 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 U2AF1L4Q8WU68 220 aaKnown RBP27.25■■□□□ 1.95
SHOX2-201ENST00000389589 SEMA4DQ92854 862 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 PTPN18Q99952 460 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 TARS2Q9BW92 718 aaKnown RBP27.25■■□□□ 1.95
SHOX2-201ENST00000389589 ZNF236Q9UL36 1845 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 A0A0B4J269 797 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 LRRN2O75325 713 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 TMEM63BQ5T3F8 832 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 LNX1Q8TBB1 728 aaPredicted RBP27.25■■□□□ 1.95
SHOX2-201ENST00000389589 FAM81BQ96LP2 452 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 NT5C1BQ96P26 610 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 FNBP1Q96RU3 617 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 MSTO1Q9BUK6 570 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 HYOU1Q9Y4L1 999 aa27.25■■□□□ 1.95
SHOX2-201ENST00000389589 A0A0A6YYK5 440 aaPredicted RBP27.24■■□□□ 1.95
SHOX2-201ENST00000389589 ZC3H11AO75152 810 aaKnown RBP eCLIP27.24■■□□□ 1.95
SHOX2-201ENST00000389589 TNFAIP3P21580 790 aa27.24■■□□□ 1.95
SHOX2-201ENST00000389589 MKRN4PQ13434 485 aaPredicted RBP27.24■■□□□ 1.95
SHOX2-201ENST00000389589 PLEKHH3Q7Z736 793 aa27.24■■□□□ 1.95
SHOX2-201ENST00000389589 TOPORSQ9NS56 1045 aaPredicted RBP27.24■■□□□ 1.95
SHOX2-201ENST00000389589 EVPLQ92817 2033 aa27.24■■□□□ 1.95
SHOX2-201ENST00000389589 SRGAP2O75044 1071 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 TFRCP02786 760 aaKnown RBP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 MATR3P43243 847 aaKnown RBP eCLIP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 NLRP11P59045 1033 aaKnown RBP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 C15orf39Q6ZRI6 1047 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 PPM1KQ8N3J5 372 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 PPTC7Q8NI37 304 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 OLIG1Q8TAK6 271 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 TAS1R2Q8TE23 839 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 MRPL4Q9BYD3 311 aaKnown RBP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 KATNBL1Q9H079 304 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 CCDC113Q9H0I3 377 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 TULP1O00294 542 aaPredicted RBP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 TFDP1Q14186 410 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 ZNF484Q5JVG2 852 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 GLYCTKQ8IVS8 523 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 AGPAT1Q99943 283 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 HAPLN2Q9GZV7 340 aa27.23■■□□□ 1.95
SHOX2-201ENST00000389589 SUCLA2Q9P2R7 463 aaPredicted RBP27.23■■□□□ 1.95
SHOX2-201ENST00000389589 ADGRA2Q96PE1 1338 aa27.22■■□□□ 1.95
SHOX2-201ENST00000389589 ASAP2O43150 1006 aa27.22■■□□□ 1.95
SHOX2-201ENST00000389589 PALMO75781 387 aa27.22■■□□□ 1.95
SHOX2-201ENST00000389589 CRELD2Q6UXH1 353 aaPredicted RBP27.22■■□□□ 1.95
SHOX2-201ENST00000389589 FAM71AQ8IYT1 594 aa27.22■■□□□ 1.95
SHOX2-201ENST00000389589 ZBTB45Q96K62 511 aaPredicted RBP27.22■■□□□ 1.95
SHOX2-201ENST00000389589 ANKFY1Q9P2R3 1169 aa27.22■■□□□ 1.95
SHOX2-201ENST00000389589 ENOSF1Q7L5Y1 443 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 LRRC71Q8N4P6 559 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 SHC3Q92529 594 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 MAML3Q96JK9 1138 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 RBAKQ9NYW8 714 aaPredicted RBP27.21■■□□□ 1.95
SHOX2-201ENST00000389589 MSCO60682 206 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 SNAI1O95863 264 aaPredicted RBP27.21■■□□□ 1.95
SHOX2-201ENST00000389589 LGALS2P05162 132 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 SRGAP2CP0DJJ0 459 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 ACOT2P49753 483 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 MAPK6Q16659 721 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 CST9Q5W186 159 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 RNF149Q8NC42 400 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 CAGE1Q8TC20 777 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 HELQQ8TDG4 1101 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 KREMEN1Q96MU8 473 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 OSBPL9Q96SU4 736 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 TLR10Q9BXR5 811 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 SLC5A4Q9NY91 659 aa27.21■■□□□ 1.95
SHOX2-201ENST00000389589 SLC15A5A6NIM6 579 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 CLDN3O15551 220 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 TOM1L1O75674 476 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 ZSCAN20P17040 1043 aaPredicted RBP27.2■■□□□ 1.95
SHOX2-201ENST00000389589 TNNI1P19237 187 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 CAPZA3Q96KX2 299 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 MMS19Q96T76 1030 aa27.2■■□□□ 1.95
SHOX2-201ENST00000389589 ZSWIM8A7E2V4 1837 aa27.2■■□□□ 1.94
SHOX2-201ENST00000389589 EDN1P05305 212 aa27.2■■□□□ 1.94
SHOX2-201ENST00000389589 HUNKP57058 714 aa27.2■■□□□ 1.94
SHOX2-201ENST00000389589 PRPF4BQ13523 1007 aaKnown RBP27.2■■□□□ 1.94
SHOX2-201ENST00000389589 ZACNQ401N2 412 aa27.2■■□□□ 1.94
SHOX2-201ENST00000389589 LMBR1Q8WVP7 490 aa27.2■■□□□ 1.94
SHOX2-201ENST00000389589 PRKCBP05771 671 aa27.19■■□□□ 1.94
SHOX2-201ENST00000389589 ADCYAP1R1P41586 468 aa27.19■■□□□ 1.94
SHOX2-201ENST00000389589 GALCP54803 685 aa27.19■■□□□ 1.94
SHOX2-201ENST00000389589 GCNT1Q02742 428 aa27.19■■□□□ 1.94
SHOX2-201ENST00000389589 EFCAB12Q6NXP0 572 aa27.19■■□□□ 1.94
SHOX2-201ENST00000389589 RHPN2Q8IUC4 686 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms