RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 FZD1Q9UP38 647 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 SMIM24O75264 130 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 TMOD1P28289 359 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 PPATQ06203 517 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 GRIK3Q13003 919 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 MREGQ8N565 214 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 PCDHB18PQ96TA0 734 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 COL4A5P29400 1685 aa12.59□□□□□ -0.39
RAPGEF3-201ENST00000389212 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 LSP1P33241 339 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 ZNF844Q08AG5 666 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 MTMR1Q13613 665 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 UBAP2Q5T6F2 1119 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 RASGEF1CQ8N431 466 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 SMIM23A6NLE4 172 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 ANKRD63C9JTQ0 380 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 CYP26A1O43174 497 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 YWHABP31946 246 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 SKOR1P84550 965 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 ARMC9Q7Z3E5 817 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLC47A2Q86VL8 602 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 GMLQ99445 158 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
RAPGEF3-201ENST00000389212 CES2O00748 559 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ICAM1P05362 532 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 RPS6P62753 249 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 MICALCLQ6ZW33 695 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 SEMA4DQ92854 862 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 C18orf8Q96DM3 657 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 RBBP6Q7Z6E9 1792 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 NCANO14594 1321 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 KIF13BQ9NQT8 1826 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 TCRBV7S2A1N4TA0A589 114 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 GOLGA6L10A6NI86 522 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 H0YGN5 161 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 PTGER2P43116 358 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 QARSP47897 775 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 CUL1Q13616 776 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 SYTL5Q8TDW5 730 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 RIT2Q99578 217 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 TMEM117Q9H0C3 514 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 TMBIM4Q9HC24 238 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 INTUQ9ULD6 942 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 NFS1Q9Y697 457 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ANKRD62A6NC57 917 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 CCDC188H7C350 402 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 WNT10BO00744 389 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 MMEP08473 750 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 MXI1P50539 228 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 SCNN1BP51168 640 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 HSD17B4P51659 736 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 PLTPP55058 493 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 NFIL3Q16649 462 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 SLC30A9Q6PML9 568 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 DNAJC14Q6Y2X3 702 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 KDM7AQ6ZMT4 941 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 KREMEN1Q96MU8 473 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 NOVA2Q9UNW9 492 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-201ENST00000389212 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 CCNE2O96020 404 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 BCRP11274 1271 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 PLS3P13797 630 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 DR1Q01658 176 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 KIF22Q14807 665 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 C2CD6Q53TS8 623 aa12.56□□□□□ -0.4
RAPGEF3-201ENST00000389212 LMBRD2Q68DH5 695 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms