RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NAF1Q96HR8 494 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF496Q96IT1 587 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 BCL7BQ9BQE9 202 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 BRD8Q9H0E9 1235 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 KCNK9Q9NPC2 374 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PKD2L2Q9NZM6 624 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 WDR35Q9P2L0 1181 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 BAG5Q9UL15 447 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 KPNA7A9QM74 516 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FOSP01100 380 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ATP6V1C1P21283 382 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PDAP1Q13442 181 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ACVR2BQ13705 512 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GCKRQ14397 625 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 GALNT15Q8N3T1 639 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ACTRT1Q8TDG2 376 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 MASTLQ96GX5 879 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF277Q9NRM2 450 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PCDHB13Q9Y5F0 798 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TOGARAM1Q9Y4F4 1720 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 M0R2C6 588 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 AP3M2P53677 418 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CERKLQ49MI3 558 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 AENQ8WTP8 325 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 KRT35Q92764 455 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 LRRC2Q9BYS8 371 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 MAF1Q9H063 256 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SUGCTQ9HAC7 445 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PTTG2Q9NZH5 202 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 IP6K2Q9UHH9 426 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 BIN1O00499 593 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 DPYSL4O14531 572 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 POLR2DO15514 142 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 IFNAR1P17181 557 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 LTKP29376 864 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 UBXN2AP68543 259 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PDCD4Q53EL6 469 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TBC1D9BQ66K14 1250 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 OLFML1Q6UWY5 402 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SYT2Q8N9I0 419 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TRIM62Q9BVG3 475 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TUFT1Q9NNX1 390 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TRAF3IP3Q9Y228 551 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 MYH9P35579 1960 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SLCO1B7G3V0H7 640 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SPOPO43791 374 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 KCNA3P22001 575 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 EEF1DP29692 281 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 BTDP43251 543 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 R3HDM1Q15032 1099 aaKnown RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 RINT1Q6NUQ1 792 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 AAGABQ6PD74 315 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SYCE2Q6PIF2 218 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 EGFL6Q8IUX8 553 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ATP11CQ8NB49 1132 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 KRT12Q99456 494 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 SLC40A1Q9NP59 571 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 PRDM5Q9NQX1 630 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-203ENST00000381196 CYP26B1Q9NR63 512 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 TUBGCP4Q9UGJ1 667 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF229Q9UJW7 825 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ITM2BQ9Y287 266 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 ALS2Q96Q42 1657 aa5.17□□□□□ -1.58
PTPRD-203ENST00000381196 FAM47DPA6NHR8 397 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 STX7O15400 261 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 RASSF9O75901 435 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 HAUS5O94927 633 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PYGLP06737 847 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CCNE1P24864 410 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 C11orf63Q6NUN7 778 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 WDR75Q8IWA0 830 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CLMNQ96JQ2 1002 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF184Q99676 751 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TRPV6Q9H1D0 765 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZWILCHQ9H900 591 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 COPG2Q9UBF2 871 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 L1RE1Q9UN81 338 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 H0Y626 953 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TRIM16O95361 564 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 DRG2P55039 364 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CTSWP56202 376 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MDH1BQ5I0G3 518 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 C8orf58Q8NAV2 365 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ZNF473Q8WTR7 871 aaKnown RBP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TMEM109Q9BVC6 243 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PLAAQ9Y263 795 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 PEAK1Q9H792 1746 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 HNRNPCP07910 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPRD-203ENST00000381196 STAT2P52630 851 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 LINC00299Q6ZSB3 139 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 MTERF3Q96E29 417 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 USP28Q96RU2 1077 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 ASIC3Q9UHC3 531 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CDY2AQ9Y6F7 541 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 CDY1Q9Y6F8 540 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 TMEM110-MUSTN1A8MSY1 372 aa5.16□□□□□ -1.58
PTPRD-203ENST00000381196 POTECB2RU33 542 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms