RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 MAGOHP61326 146 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 RASA3Q14644 834 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 SNRNP35Q16560 246 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 UBAP2Q5T6F2 1119 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 FBXO25Q8TCJ0 367 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 CD101Q93033 1021 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 MAGOHBQ96A72 148 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 CCDC127Q96BQ5 260 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 POP1Q99575 1024 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 WDR46O15213 610 aaKnown RBP21■□□□□ 0.95
SHROOM1-202ENST00000378676 MTA2O94776 668 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 ERLIN2O94905 339 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 PLTPP55058 493 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 RPS6P62753 249 aaKnown RBP21■□□□□ 0.95
SHROOM1-202ENST00000378676 XKR9Q5GH70 373 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 C4orf19Q8IY42 314 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 SHC3Q92529 594 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21■□□□□ 0.956e-6■■□□□ 12.8
SHROOM1-202ENST00000378676 TRPC6Q9Y210 931 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 USP20Q9Y2K6 914 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 SRRM3A6NNA2 597 aaPredicted RBP21■□□□□ 0.95
SHROOM1-202ENST00000378676 PHF20L1A8MW92 1017 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 CTNNA2P26232 953 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 SLC38A10Q9HBR0 1119 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 TBC1D22BQ9NU19 505 aa21■□□□□ 0.95
SHROOM1-202ENST00000378676 PMM2O15305 246 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 PYGMP11217 842 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 MAP3K10Q02779 954 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 ODF2Q5BJF6 829 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 TMEM161BQ8NDZ6 487 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 HELQQ8TDG4 1101 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 BSNDQ8WZ55 320 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 RPS6KC1Q96S38 1066 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 PSMD1Q99460 953 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 NUP85Q9BW27 656 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 TBX20Q9UMR3 447 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 CCDC169A6NNP5 214 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 RPL21P46778 160 aaKnown RBP20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 SOX10P56693 466 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 PSMC5P62195 406 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 IFFO1Q0D2I5 559 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 MTMR14Q8NCE2 650 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 ZNF564Q8TBZ8 553 aaPredicted RBP20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 DHX38Q92620 1227 aaKnown RBP20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 TLCD1Q96CP7 247 aa20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 ZBED3Q96IU2 234 aaPredicted RBP20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 PDGFDQ9GZP0 370 aaPredicted RBP20.99■□□□□ 0.95
SHROOM1-202ENST00000378676 WNT10BO00744 389 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 MEFVO15553 781 aaPredicted RBP20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 CAND2O75155 1236 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 GZMAP12544 262 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 CHRNA3P32297 505 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 PMS2P54278 862 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 CLUL1Q15846 466 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 SPDYCQ5MJ68 293 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 SEL1L2Q5TEA6 688 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 ICE2Q659A1 982 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 SLC39A4Q6P5W5 647 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 NSMFQ6X4W1 530 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 PARD3BQ8TEW8 1205 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 RNF25Q96BH1 459 aaPredicted RBP20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 ZNF653Q96CK0 615 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 CYFIP2Q96F07 1278 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 FAM84AQ96KN4 292 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 RASAL2Q9UJF2 1139 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 PCDHA3Q9Y5H8 950 aa20.98■□□□□ 0.95
SHROOM1-202ENST00000378676 TRAPPC3O43617 180 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 CALCAP01258 141 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 NPTX2P47972 431 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 QPCTQ16769 361 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 MAP4K3Q8IVH8 894 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 PDCD2LQ9BRP1 358 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 TIPINQ9BVW5 301 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 PCYOX1Q9UHG3 505 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 CYP1A2P05177 515 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 CYP11B1P15538 503 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 HSPA6P17066 643 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 MFAP3P55082 362 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 MCCD1P59942 119 aaPredicted RBP20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 SNRPFP62306 86 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 KRT39Q6A163 491 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 ANO5Q75V66 913 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 SPATS2Q86XZ4 545 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 TAS1R2Q8TE23 839 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 WNT8AQ9H1J5 351 aa20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 GEMIN8Q9NWZ8 242 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-202ENST00000378676 TESPA1A2RU30 521 aaPredicted RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 GMNCA6NCL1 334 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 WDR64B1ANS9 1081 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 KIAA0754O94854 1291 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 NUDT17P0C025 328 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 DRG2P55039 364 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 SIX1Q15475 284 aaPredicted RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 CCDC137Q6PK04 289 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 RTKN2Q8IZC4 609 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 RAPGEF5Q92565 580 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 IWS1Q96ST2 819 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 RMDN3Q96TC7 470 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms