RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TBKBP1A7MCY6 615 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 BIN1O00499 593 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 PPP1R37O75864 691 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ITGA4P13612 1032 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 RAB27AP51159 221 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 EHHADHQ08426 723 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 CLLU1OSQ5K130 101 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 AGMOQ6ZNB7 445 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 TMEM192Q8IY95 271 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 KIAA0895Q8NCT3 520 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 SLC17A8Q8NDX2 589 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 HAPLN2Q9GZV7 340 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 SLC28A3Q9HAS3 691 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ZNF623O75123 536 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 EOMESO95936 686 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 MLH1P40692 756 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 MPZL3Q6UWV2 235 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 ZPBP2Q6X784 338 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 CCDC47Q96A33 483 aaKnown RBP12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 ACCSQ96QU6 501 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 GAD1Q99259 594 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 TRAIPQ9BWF2 469 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 STRA6Q9BX79 667 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 CXCL16Q9H2A7 254 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 PTPRHQ9HD43 1115 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 POMCP01189 267 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 MCM4P33991 863 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 HOXD13P35453 343 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 PGBD4Q96DM1 585 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 CCDC51Q96ER9 411 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 GBP3Q9H0R5 595 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 RSAD1Q9HA92 442 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
DEPDC4-202ENST00000378244 ABLIM1O14639 778 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 SMC2O95347 1197 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 SKIP12755 728 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 ZBTB41Q5SVQ8 909 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 POMGNT1Q8WZA1 660 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 PCIF1Q9H4Z3 704 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 RECQL4O94761 1208 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 RHOBTB3O94955 611 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 PROZP22891 400 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 PBX3P40426 434 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 ACOT2P49753 483 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 RAB30Q15771 203 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 SPOUT1Q5T280 376 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 MRPL10Q7Z7H8 261 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF689Q96CS4 500 aaPredicted RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 TYW1Q9NV66 732 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
DEPDC4-202ENST00000378244 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 CLIC2O15247 247 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 CSPG5O95196 566 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 ADSSP30520 456 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 TNFSF9P41273 254 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 DCAF4L1Q3SXM0 396 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 GLRA4Q5JXX5 417 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 FIBCD1Q8N539 461 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 ZSWIM2Q8NEG5 633 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF507Q8TCN5 953 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 SAAL1Q96ER3 474 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 CASD1Q96PB1 797 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 CBWD1Q9BRT8 395 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 TMEM206Q9H813 350 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 PRUNE2Q8WUY3 3088 aa12.81□□□□□ -0.36
DEPDC4-202ENST00000378244 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 GOLGA8IPA6NC78 632 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 GOLGA8JA6NMD2 632 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 OFD1O75665 1012 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ABCD1P33897 745 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 SCNN1GP51170 649 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 TAP1Q03518 808 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 SPAG1Q07617 926 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 MCL1Q07820 350 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 PSMD2Q13200 908 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ALCAMQ13740 583 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 Q7L0L9 218 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms