RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 AHCYL1O43865 530 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 PSMC2P35998 433 aaKnown RBP16.99■□□□□ 0.31
CKAP4-201ENST00000378026 SIK1P57059 783 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 ARMC3Q5W041 872 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 RNF43Q68DV7 783 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 MAGEB18Q96M61 343 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 GSTTP1A0A1W2PQM5 241 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 CCNG1P51959 295 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 FAM43BQ6ZT52 329 aaPredicted RBP16.99■□□□□ 0.31
CKAP4-201ENST00000378026 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
CKAP4-201ENST00000378026 RHOT2Q8IXI1 618 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 RPUSD2Q8IZ73 545 aaKnown RBP16.99■□□□□ 0.31
CKAP4-201ENST00000378026 MYCT1Q8N699 235 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 UBE2TQ9NPD8 197 aaPredicted RBP16.99■□□□□ 0.31
CKAP4-201ENST00000378026 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
CKAP4-201ENST00000378026 MIF4GDA9UHW6 222 aaKnown RBP16.98■□□□□ 0.31
CKAP4-201ENST00000378026 RASA4BC9J798 803 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 RASA4O43374 803 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 ITGA8P53708 1063 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 SGO2Q562F6 1265 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 HP1BP3Q5SSJ5 553 aaPredicted RBP16.98■□□□□ 0.31
CKAP4-201ENST00000378026 CYP4F22Q6NT55 531 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
CKAP4-201ENST00000378026 CAPN12Q6ZSI9 719 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 DNAJC9Q8WXX5 260 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 MXD3Q9BW11 206 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 METTL5Q9NRN9 209 aaKnown RBP16.98■□□□□ 0.31
CKAP4-201ENST00000378026 RGL1Q9NZL6 768 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 TTC4O95801 387 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 ALAS1P13196 640 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 HSPA6P17066 643 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 ATP6V1C1P21283 382 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 APEX2Q9UBZ4 518 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 ITGB4P16144 1822 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 SNAP25P60880 206 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 KLC1Q07866 573 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 STRN3Q13033 797 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 CCDC6Q16204 474 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 PPP1R15BQ5SWA1 713 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 SPIRE2Q8WWL2 714 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 DENND2DQ9H6A0 471 aaPredicted RBP16.98■□□□□ 0.31
CKAP4-201ENST00000378026 CHST7Q9NS84 486 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 PHTF1Q9UMS5 762 aa16.98■□□□□ 0.31
CKAP4-201ENST00000378026 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 ZBTB39O15060 712 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 SLURP2P0DP57 97 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 AKR1B1P15121 316 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 POLGP54098 1239 aaPredicted RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 WDR4P57081 412 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 GPC5P78333 572 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 CWF19L1Q69YN2 538 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 PHLDB2Q86SQ0 1253 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 TP73O15350 636 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 SLC16A3O15427 465 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 ADCY8P40145 1251 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 MRPS35P82673 323 aaKnown RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 IL9RQ01113 521 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 MYL7Q01449 175 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 LRMDAQ9H2I8 198 aa16.97■□□□□ 0.31
CKAP4-201ENST00000378026 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
CKAP4-201ENST00000378026 A0A1B0GVG6 124 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 WFS1O76024 890 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 CLUL1Q15846 466 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.31
CKAP4-201ENST00000378026 ANKRD2Q9GZV1 360 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 IRAK4Q9NWZ3 460 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 NINJ2Q9NZG7 142 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 FAM13AO94988 1023 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
CKAP4-201ENST00000378026 ERFP50548 548 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 GSTO1P78417 241 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 RFWD3Q6PCD5 774 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 KAT5Q92993 513 aa16.96■□□□□ 0.31
CKAP4-201ENST00000378026 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
CKAP4-201ENST00000378026 MAPK13O15264 365 aa16.95■□□□□ 0.3
CKAP4-201ENST00000378026 SKIV2L2P42285 1042 aaKnown RBP16.95■□□□□ 0.3
CKAP4-201ENST00000378026 MKRN3Q13064 507 aaKnown RBP16.95■□□□□ 0.3
CKAP4-201ENST00000378026 SIX1Q15475 284 aaPredicted RBP16.95■□□□□ 0.3
CKAP4-201ENST00000378026 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
CKAP4-201ENST00000378026 C4orf33Q8N1A6 199 aa16.95■□□□□ 0.3
CKAP4-201ENST00000378026 AGGF1Q8N302 714 aaeCLIP16.95■□□□□ 0.3
CKAP4-201ENST00000378026 ASAP3Q8TDY4 903 aa16.95■□□□□ 0.3
CKAP4-201ENST00000378026 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms