RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GRIK3Q13003 919 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 COASYQ13057 564 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 DAW1Q8N136 415 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 MSLNLQ96KJ4 702 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 ZFP42Q96MM3 310 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 PLIN2Q99541 437 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 KMT5AQ9NQR1 393 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 PRKAG3Q9UGI9 489 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 KCNG1Q9UIX4 513 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 BARX2Q9UMQ3 279 aaPredicted RBP18.53■□□□□ 0.56
HMGN4-201ENST00000377575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 C2orf71A6NGG8 1288 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 K7ERI5 159 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 MBTPS2O43462 519 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 STX6O43752 255 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 PLA2G4BP0C869 781 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 CTSAP10619 480 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 DSC1Q08554 894 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 MAPK7Q13164 816 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 SMAD2Q15796 467 aaKnown RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 ATF7IP2Q5U623 682 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 FAM178BQ8IXR5 827 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 COLGALT2Q8IYK4 626 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 MRPL43Q8N983 215 aaKnown RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 TMEM87AQ8NBN3 555 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 BCL7CQ8WUZ0 217 aaPredicted RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 TMEM134Q9H6X4 195 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 CLEC1BQ9P126 229 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 ARHGAP28Q9P2N2 729 aa18.52■□□□□ 0.56
HMGN4-201ENST00000377575 RBM19Q9Y4C8 960 aaKnown RBP18.52■□□□□ 0.56
HMGN4-201ENST00000377575 TTLL13PA6NNM8 815 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 NRP1O14786 923 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 EDN1P05305 212 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 OR1G1P47890 313 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 SMRP1Q8NCR6 262 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 MRPL4Q9BYD3 311 aaKnown RBP18.51■□□□□ 0.55
HMGN4-201ENST00000377575 MTMR6Q9Y217 621 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 PRG3Q9Y2Y8 225 aaPredicted RBP18.51■□□□□ 0.55
HMGN4-201ENST00000377575 IRAK3Q9Y616 596 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 CLIC4Q9Y696 253 aa18.51■□□□□ 0.55
HMGN4-201ENST00000377575 CITO14578 2027 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 C5orf42Q9H799 3197 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 TRIP11Q15643 1979 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 RECQL4O94761 1208 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 CXCL14O95715 111 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
HMGN4-201ENST00000377575 PLS3P13797 630 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 SSTR3P32745 418 aaPredicted RBP18.5■□□□□ 0.55
HMGN4-201ENST00000377575 SMTNP53814 917 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 RAD51AP2Q09MP3 1159 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 TMEM184AQ6ZMB5 413 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 VN1R2Q8NFZ6 395 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 CASP10Q92851 521 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 POP1Q99575 1024 aaKnown RBP18.5■□□□□ 0.55
HMGN4-201ENST00000377575 SNTG2Q9NY99 539 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
HMGN4-201ENST00000377575 H0YCG3 227 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 PLCG1P19174 1290 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 TXLNAP40222 546 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 GRIN1Q05586 938 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 STRN3Q13033 797 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 KCNC3Q14003 757 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 KARSQ15046 597 aaKnown RBP18.49■□□□□ 0.55
HMGN4-201ENST00000377575 PTPAQ15257 358 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 NT5DC1Q5TFE4 455 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 EEF1DP3Q658K8 133 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 LLGL2Q6P1M3 1020 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 GPBP1Q86WP2 473 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 ADHFE1Q8IWW8 467 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 GJD3Q8N144 294 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 GSTCDQ8NEC7 633 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 SPIRE2Q8WWL2 714 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 VN1R3Q9BXE9 311 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 CCSER1Q9C0I3 900 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 MARCH5Q9NX47 278 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 MIOSQ9NXC5 875 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
HMGN4-201ENST00000377575 ODF2LQ9ULJ1 636 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 TNFSF13BQ9Y275 285 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 USP20Q9Y2K6 914 aa18.49■□□□□ 0.55
HMGN4-201ENST00000377575 SLC16A4O15374 487 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 CLASP2O75122 1294 aaKnown RBP18.48■□□□□ 0.55
HMGN4-201ENST00000377575 SOD2P04179 222 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 URODP06132 367 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 PDIA4P13667 645 aaKnown RBP18.48■□□□□ 0.55
HMGN4-201ENST00000377575 MARCKSP29966 332 aaPredicted RBP18.48■□□□□ 0.55
HMGN4-201ENST00000377575 RBM10P98175 930 aaKnown RBP18.48■□□□□ 0.55
HMGN4-201ENST00000377575 ZP2Q05996 745 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 PTPN14Q15678 1187 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 ZNF568Q3ZCX4 644 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 ANKRD54Q6NXT1 300 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 AUTS2Q8WXX7 1259 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 RAD54LQ92698 747 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 ACO2Q99798 780 aaKnown RBP18.48■□□□□ 0.55
HMGN4-201ENST00000377575 HERC2P3Q9BVR0 1158 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 COLEC11Q9BWP8 271 aa18.48■□□□□ 0.55
HMGN4-201ENST00000377575 CCDC39Q9UFE4 941 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms