RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TTLL12Q14166 644 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 PRRT2Q7Z6L0 340 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 RHOT2Q8IXI1 618 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 EPS8L1Q8TE68 723 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 IFT81Q8WYA0 676 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 EXOC4Q96A65 974 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 NT5C1BQ96P26 610 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 FAM213AQ9BRX8 229 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 AP1M1Q9BXS5 423 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 KCNG1Q9UIX4 513 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 COQ4Q9Y3A0 265 aa21.82■■□□□ 1.08
VSX1-202ENST00000376709 MAFBQ9Y5Q3 323 aaPredicted RBP21.82■■□□□ 1.08
VSX1-202ENST00000376709 SYNGAP1Q96PV0 1343 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 RNF40O75150 1001 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 SYF2O95926 243 aaKnown RBP21.81■■□□□ 1.08
VSX1-202ENST00000376709 OATP04181 439 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 ZBTB48P10074 688 aaPredicted RBP21.81■■□□□ 1.08
VSX1-202ENST00000376709 GGCXP38435 758 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 LIG4P49917 911 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 GPC3P51654 580 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 PPATQ06203 517 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 TAF3Q5VWG9 929 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 TAS1R3Q7RTX0 852 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 TAS1R2Q8TE23 839 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 CALR3Q96L12 384 aaKnown RBP21.81■■□□□ 1.08
VSX1-202ENST00000376709 RAB20Q9NX57 234 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 A0A0G2JMZ2 1700 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 CYP26A1O43174 497 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 RAD51CO43502 376 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 GTF2H1P32780 548 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 STRN3Q13033 797 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 PAK2Q13177 524 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 NCAPG2Q86XI2 1143 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 RIOX2Q8IUF8 465 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 SCFD2Q8WU76 684 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 SHC3Q92529 594 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 TMEM143Q96AN5 459 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 PAGR1Q9BTK6 254 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 CTTNBP2NLQ9P2B4 639 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 NFU1Q9UMS0 254 aa21.81■■□□□ 1.08
VSX1-202ENST00000376709 KRIT1O00522 736 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ATP4AP20648 1035 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 CARSP49589 748 aaKnown RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 IRX3P78415 501 aaPredicted RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 SV2AQ7L0J3 742 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 NOP9Q86U38 636 aaKnown RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 SLC47A2Q86VL8 602 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ERO1BQ86YB8 467 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ANKRD13AQ8IZ07 590 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 SLC7A3Q8WY07 619 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 CAVIN3Q969G5 261 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ISCUQ9H1K1 167 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 COG5Q9UP83 839 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ZNF233A6NK53 670 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 ATG7O95352 703 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 EPHX2P34913 555 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 RASGEF1CQ8N431 466 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 RIN2Q8WYP3 895 aaPredicted RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 SPATC1LQ9H0A9 340 aa21.8■■□□□ 1.08
VSX1-202ENST00000376709 NOCTQ9UK39 431 aaKnown RBP21.8■■□□□ 1.08
VSX1-202ENST00000376709 RTN2O75298 545 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 UBA1P22314 1058 aaKnown RBP21.79■■□□□ 1.08
VSX1-202ENST00000376709 NF2P35240 595 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 LMAN1P49257 510 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 PRPF4BQ13523 1007 aaKnown RBP21.79■■□□□ 1.08
VSX1-202ENST00000376709 DPY19L2Q6NUT2 758 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 USP50Q70EL3 339 aaPredicted RBP21.79■■□□□ 1.08
VSX1-202ENST00000376709 HELQQ8TDG4 1101 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 ASCC2Q9H1I8 757 aaPredicted RBP21.79■■□□□ 1.08
VSX1-202ENST00000376709 ACP6Q9NPH0 428 aa21.79■■□□□ 1.08
VSX1-202ENST00000376709 LRRIQ4A6NIV6 560 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 CCDC188H7C350 402 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 PDE6CP51160 858 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 GPC5P78333 572 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 GOLGA6L1Q8N7Z2 621 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 L3MBTL3Q96JM7 780 aaPredicted RBP21.78■■□□□ 1.08
VSX1-202ENST00000376709 PORCNQ9H237 461 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 FAM204AQ9H8W3 233 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 SPDYE5A6NIY4 337 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 EXTL3O43909 919 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 CHRNB2P17787 502 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 NNTQ13423 1086 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 DEPTORQ8TB45 409 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 CASKIN2Q8WXE0 1202 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 PCDHB18PQ96TA0 734 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 R3HDMLQ9H3Y0 253 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 DHX33Q9H6R0 707 aaKnown RBP21.78■■□□□ 1.08
VSX1-202ENST00000376709 KIAA1586Q9HCI6 787 aa21.78■■□□□ 1.08
VSX1-202ENST00000376709 AGPSO00116 658 aa21.77■■□□□ 1.08
VSX1-202ENST00000376709 SART1O43290 800 aaKnown RBP21.77■■□□□ 1.08
VSX1-202ENST00000376709 MMEP08473 750 aa21.77■■□□□ 1.08
VSX1-202ENST00000376709 GZMAP12544 262 aa21.77■■□□□ 1.08
VSX1-202ENST00000376709 CYP11B1P15538 503 aa21.77■■□□□ 1.08
VSX1-202ENST00000376709 DDX47Q9H0S4 455 aaKnown RBP21.77■■□□□ 1.08
VSX1-202ENST00000376709 PSD3Q9NYI0 1048 aa21.77■■□□□ 1.08
VSX1-202ENST00000376709 DIS3Q9Y2L1 958 aaKnown RBP21.77■■□□□ 1.08
VSX1-202ENST00000376709 CNMDO75829 334 aa21.77■■□□□ 1.07
VSX1-202ENST00000376709 FARP2O94887 1054 aaPredicted RBP21.77■■□□□ 1.07
VSX1-202ENST00000376709 FGGP02679 453 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms