RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 AGO2Q9UKV8 859 aaKnown RBP12.52□□□□□ -0.41
DDR1-227ENST00000376570 TJP1Q07157 1748 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 ANO9A1A5B4 782 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 F8VZ95 297 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 ZBTB41Q5SVQ8 909 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 CCDC60Q8IWA6 550 aaPredicted RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 LENG9Q96B70 501 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 TBC1D31Q96DN5 1066 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 VAV3Q9UKW4 847 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 IGKV6D-41A0A0C4DH26 115 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 PSMD10O75832 226 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 PLS3P13797 630 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 FLT3P36888 993 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 IRX4P78413 519 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 AMPD2Q01433 879 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 PGM5Q15124 567 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 STXBP2Q15833 593 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 MEA1Q16626 185 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 CYP2C8P10632 490 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 ATP11AP98196 1134 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 PAPD7Q5XG87 772 aaKnown RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 HGSNATQ68CP4 663 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 KRT39Q6A163 491 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 CTAGE3PQ8IX95 158 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 TUFT1Q9NNX1 390 aa12.51□□□□□ -0.41
DDR1-227ENST00000376570 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
DDR1-227ENST00000376570 SGK1O00141 431 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 CCNE2O96020 404 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 SCP2P22307 547 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 MAP2K2P36507 400 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 GPC5P78333 572 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 ATP13A4Q4VNC1 1196 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 FBXL13Q8NEE6 735 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 MYH6P13533 1939 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 SSU72P8A0A1W2PR75 194 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 HOXD13P35453 343 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 CCDC137Q6PK04 289 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 SV2AQ7L0J3 742 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 CEP120Q8N960 986 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 CYFIP2Q96F07 1278 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 SPATA33Q96N06 139 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■■□□ 17.9
DDR1-227ENST00000376570 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 STK33Q9BYT3 514 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 MIS12Q9H081 205 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 STK38LQ9Y2H1 464 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 CEP83Q9Y592 693 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 GOLGA4Q13439 2230 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 GOLGA8RI6L899 631 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 VWA5AO00534 786 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 TUBBP07437 444 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 RRM1P23921 792 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 CDH8P55286 799 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 LONRF1Q17RB8 773 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 PPP6R3Q5H9R7 873 aaPredicted RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 TACO1Q9BSH4 297 aaKnown RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
DDR1-227ENST00000376570 BAIAP2L1Q9UHR4 511 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 PNMA2Q9UL42 364 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
DDR1-227ENST00000376570 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 HLA-DRAP01903 254 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 KRT1P04264 644 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 STAT5BP51692 787 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 BACE1P56817 501 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
DDR1-227ENST00000376570 ZNF568Q3ZCX4 644 aa12.49□□□□□ -0.41
DDR1-227ENST00000376570 MICALCLQ6ZW33 695 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms