RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 KRT37O76014 449 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 PMS2P54278 862 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 CDH6P55285 790 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 ZNF713Q8N859 430 aaPredicted RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 BTBD6Q96KE9 485 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 SEPT5Q99719 369 aaPredicted RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 AIPL1Q9NZN9 384 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 CEP72Q9P209 647 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 PCDHB7Q9Y5E2 793 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 RARBP10826 455 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 KCNA2P16389 499 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 TNFAIP2Q03169 654 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 KNOP1Q1ED39 458 aaKnown RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 BTBD8Q5XKL5 378 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 RCSD1Q6JBY9 416 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 LRRC8EQ6NSJ5 796 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 BZW1Q7L1Q6 419 aaKnown RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 C11orf96Q7Z7L8 435 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 CSE1LP55060 971 aaKnown RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 HSP90AA5PQ58FG0 334 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 TRIM15Q9C019 465 aa15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 CNOT7Q9UIV1 285 aaKnown RBP15.6■□□□□ 0.09
NOTCH4-201ENST00000375023 CHGBP05060 677 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 SEPT8Q92599 483 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 FAM161BQ96MY7 647 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 UNC45AQ9H3U1 944 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 DCP1AQ9NPI6 582 aaPredicted RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 ZC3H4Q9UPT8 1303 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 RHOT2Q8IXI1 618 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 CLMNQ96JQ2 1002 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 CNOT10Q9H9A5 744 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 CHORDC1Q9UHD1 332 aaPredicted RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 KRT14P02533 472 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 AKR1B1P15121 316 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 DNAJB2P25686 324 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 ALDH18A1P54886 795 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 EFTUD2Q15029 972 aaKnown RBP eCLIP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 SPDYAQ5MJ70 313 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 PID1Q7Z2X4 250 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 WDR75Q8IWA0 830 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 NUP93Q8N1F7 819 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 PNMA5Q96PV4 448 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 DYNC1LI2O43237 492 aaPredicted RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 CHRNA3P32297 505 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 MAPK9P45984 424 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 QARSP47897 775 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 MORF4L2Q15014 288 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 KIZQ2M2Z5 673 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 UTYO14607 1347 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 LRRC74AQ0VAA2 488 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 CACUL1Q86Y37 369 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 MRPL4Q9BYD3 311 aaKnown RBP15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 THEGQ9P2T0 379 aa15.59■□□□□ 0.09
NOTCH4-201ENST00000375023 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 ACTN3Q08043 901 aaPredicted RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 APOBEC3FQ8IUX4 373 aaKnown RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 ATP11CQ8NB49 1132 aa15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 NPHP4O75161 1426 aaPredicted RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 KCNN4O15554 427 aa15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 CTIFO43310 598 aaKnown RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 GJD4Q96KN9 370 aaPredicted RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 TGS1Q96RS0 853 aaKnown RBP15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 AURKCQ9UQB9 309 aa15.58■□□□□ 0.09
NOTCH4-201ENST00000375023 COL15A1P39059 1388 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 CYP27B1O15528 508 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 EFHC2Q5JST6 749 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 RBM41Q96IZ5 413 aaKnown RBP15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 RNF103-CHMP3A0A140T963 221 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 PPP3CCP48454 512 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 VEPH1Q14D04 833 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 IGKV5-2P06315 115 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 MDM2Q00987 491 aaPredicted RBP15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 ZNF235Q14590 738 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 C9orf131Q5VYM1 1079 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 AP1ARQ63HQ0 302 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 ABHD8Q96I13 439 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 YME1L1Q96TA2 773 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 GCOM2Q9BZD3 368 aaPredicted RBP15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 AXIN2Q9Y2T1 843 aa15.58■□□□□ 0.08
NOTCH4-201ENST00000375023 MEFVO15553 781 aaPredicted RBP15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 LRRC36Q1X8D7 754 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 HSPA8P11142 646 aaKnown RBP15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 ETFBP38117 255 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 ARSEP51690 589 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 CCDC33Q8N5R6 958 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 SLC25A41Q8N5S1 370 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 BTN2A2Q8WVV5 523 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 SENP1Q9P0U3 644 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 SMARCA1P28370 1054 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 SREBF2Q12772 1141 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 SPATA2LQ8IUW3 424 aaPredicted RBP15.57■□□□□ 0.08
NOTCH4-201ENST00000375023 NRBF2Q96F24 287 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms