RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HBP1O60381 514 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LDHAP00338 332 aaKnown RBP19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TCP1P17987 556 aaKnown RBP19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FAM110CQ1W6H9 321 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MAMDC4Q6UXC1 1216 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZPBP2Q6X784 338 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 C15orf39Q6ZRI6 1047 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SEMA4DQ92854 862 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 KATNBL1Q9H079 304 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CCDC113Q9H0I3 377 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 RRAGCQ9HB90 399 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ARGLU1Q9NWB6 273 aaPredicted RBP19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 HYOU1Q9Y4L1 999 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ANK1P16157 1881 aa19.48■□□□□ 0.71
HLA-DQB1-201ENST00000374943 A0A0B4J269 797 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 BUB1O43683 1085 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 H2AFZP0C0S5 128 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZSCAN20P17040 1043 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MARK3P27448 753 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MKRN3Q13064 507 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 DRP2Q13474 957 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 GRB14Q14449 540 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 IFI16Q16666 785 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 H2AFVQ71UI9 128 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SV2AQ7L0J3 742 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ZNF572Q7Z3I7 529 aaPredicted RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MSANTD4Q8NCY6 345 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PRPF31Q8WWY3 499 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ADGRA2Q96PE1 1338 aa19.47■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SRGAP2O75044 1071 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LRRN2O75325 713 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 GH1P01241 217 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 MFAP3P55082 362 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FAM71AQ8IYT1 594 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 FAM81BQ96LP2 452 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 POP1Q99575 1024 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TLR10Q9BXR5 811 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 HAPLN2Q9GZV7 340 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 C2orf40Q9H1Z8 148 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TOPORSQ9NS56 1045 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 RAB20Q9NX57 234 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 KAT6AQ92794 2004 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PALMO75781 387 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 EDN1P05305 212 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 NLRP11P59045 1033 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 LAMTOR4Q0VGL1 99 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TMEM63BQ5T3F8 832 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 CRELD2Q6UXH1 353 aaPredicted RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 GPR142Q7Z601 462 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 HELQQ8TDG4 1101 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TAS1R2Q8TE23 839 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 U2AF1L4Q8WU68 220 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 SHC3Q92529 594 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 KREMEN1Q96MU8 473 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 NT5C1BQ96P26 610 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 OSBPL9Q96SU4 736 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 PTPN18Q99952 460 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 TARS2Q9BW92 718 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 ERAP1Q9NZ08 941 aa19.46■□□□□ 0.71
HLA-DQB1-201ENST00000374943 NCANO14594 1321 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MSCO60682 206 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MAPK4P31152 587 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CLCN6P51797 869 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 NAP1L1P55209 391 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 HTRA3P83110 453 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ITIH3Q06033 890 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ENOSF1Q7L5Y1 443 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 CREG2Q8IUH2 290 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GLYCTKQ8IVS8 523 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZBTB8OSQ8IWT0 167 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PPTC7Q8NI37 304 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MMS19Q96T76 1030 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 AGPAT1Q99943 283 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MSTO1Q9BUK6 570 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MRPL4Q9BYD3 311 aaKnown RBP19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ANKZF1Q9H8Y5 726 aa19.45■□□□□ 0.7
HLA-DQB1-201ENST00000374943 DOCK3Q8IZD9 2030 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GRID2IPA4D2P6 1211 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TMEM253P0C7T8 217 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TNFAIP3P21580 790 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZACNQ401N2 412 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZNF484Q5JVG2 852 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MEI1Q5TIA1 1274 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TRPC6Q9Y210 931 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MGAMO43451 1857 aa19.44■□□□□ 0.7
HLA-DQB1-201ENST00000374943 SNAI1O95863 264 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 LGALS2P05162 132 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 TUBBP07437 444 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 GCNT1Q02742 428 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PRPF4BQ13523 1007 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PLEKHH3Q7Z736 793 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 PPM1KQ8N3J5 372 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZNF516Q92618 1163 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 KAT5Q92993 513 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 MAML3Q96JK9 1138 aa19.43■□□□□ 0.7
HLA-DQB1-201ENST00000374943 ZBTB45Q96K62 511 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms