RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 STXBP2Q15833 593 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 WDR44Q5JSH3 913 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 SV2AQ7L0J3 742 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 LRRN4Q8WUT4 740 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 CRYGNQ8WXF5 182 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ZNF302Q9NR11 478 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ADGRA3Q8IWK6 1321 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 FOXO6A8MYZ6 492 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 PSAPP07602 524 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 CFHP08603 1231 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ADSSP30520 456 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 NUMBP49757 651 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MNAT1P51948 309 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 TPCN2Q8NHX9 752 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 LPAR1Q92633 364 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 NT5C1BQ96P26 610 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 RIT2Q99578 217 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 SYNCQ9H7C4 482 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 C10orf88Q9H8K7 445 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ANAPC7Q9UJX3 599 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 SSU72P8A0A1W2PR75 194 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-203ENST00000374429 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 TNFSF9P41273 254 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 GUCY1A3Q02108 690 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 HSDL1Q3SXM5 330 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 HYIQ5T013 277 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 GSTA5Q7RTV2 222 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 CASKIN2Q8WXE0 1202 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 AGPAT1Q99943 283 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 NUP85Q9BW27 656 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 NUCKS1Q9H1E3 243 aaKnown RBP11.62□□□□□ -0.55
CXCL12-203ENST00000374429 TBK1Q9UHD2 729 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-203ENST00000374429 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 TCRBV7S2A1N4TA0A589 114 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 THAP12O43422 761 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
CXCL12-203ENST00000374429 NT5C2P49902 561 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 PDE6CP51160 858 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 GNGT1P63211 74 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
CXCL12-203ENST00000374429 C18orf8Q96DM3 657 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 PWWP2AQ96N64 755 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 SELENOSQ9BQE4 189 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 SIX2Q9NPC8 291 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 C1orf112Q9NSG2 853 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 CYP39A1Q9NYL5 469 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 HPCAL4Q9UM19 191 aa11.62□□□□□ -0.55
CXCL12-203ENST00000374429 CLDN3O15551 220 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 COMTP21964 271 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 CCT5P48643 541 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 INTS8Q75QN2 995 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PIK3R5Q8WYR1 880 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PAIP2Q9BPZ3 127 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 STK33Q9BYT3 514 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 TMEM206Q9H813 350 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 OLFML3Q9NRN5 406 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 BTBD7Q9P203 1132 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 ASIC3Q9UHC3 531 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PGRMC1O00264 195 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 IFNAR2P48551 515 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 WNT7BP56706 349 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 KRT71Q3SY84 523 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 SUPT20HL1Q3ZLR7 823 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 FIGNQ5HY92 759 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 RNF187Q5TA31 235 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 VSIG10LQ86VR7 867 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 CYP26B1Q9NR63 512 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 HOXC10Q9NYD6 342 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 RBAKQ9NYW8 714 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 COG5Q9UP83 839 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 AKT3Q9Y243 479 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 ZNF233A6NK53 670 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 SPDYE16A6NNV3 312 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 GRAP2O75791 330 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 RGS20O76081 388 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 KRT76Q01546 638 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 EMC2Q15006 297 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 MOXD1Q6UVY6 613 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 EPM2AIP1Q7L775 607 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 ZNF513Q8N8E2 541 aaPredicted RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
CXCL12-203ENST00000374429 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
CXCL12-203ENST00000374429 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms