RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KYAT1Q16773 422 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 UVSSAQ2YD98 709 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 IRF2BP1Q8IU81 584 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 GPD1LQ8N335 351 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 TRAIPQ9BWF2 469 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
TMEM53-204ENST00000372243 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 CDT1Q9H211 546 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 PCIF1Q9H4Z3 704 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 FRMD4BQ9Y2L6 1034 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 OGTO15294 1046 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 EXTL3O43909 919 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 FAM189A1O60320 539 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 NBNO60934 754 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 TIMP1P01033 207 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CXCL10P02778 98 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 EEF1GP26641 437 aaKnown RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 MATR3P43243 847 aaKnown RBP eCLIP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CYP2J2P51589 502 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 POU5F1Q01860 360 aaKnown RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 SPAG1Q07617 926 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 GSE1Q14687 1217 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 AKAP3O75969 853 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 EPB41P11171 864 aaKnown RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CYP2C18P33260 490 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 MCCD1P59942 119 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 DSC3Q14574 896 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 PLEKHG4Q58EX7 1191 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CEP135Q66GS9 1140 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 TNS4Q8IZW8 715 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 APBB2Q92870 758 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 TRIM43Q96BQ3 446 aaPredicted RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 FTHL17Q9BXU8 183 aa17.28■□□□□ 0.36
TMEM53-204ENST00000372243 METTL14Q9HCE5 456 aaKnown RBP17.28■□□□□ 0.36
TMEM53-204ENST00000372243 MKI67P46013 3256 aaKnown RBP17.27■□□□□ 0.35
TMEM53-204ENST00000372243 GOLGA6L3A6NEY3 463 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 CASP4P49662 377 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 CCL23P55773 120 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 ENPEPQ07075 957 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 SNRNP35Q16560 246 aaKnown RBP17.27■□□□□ 0.35
TMEM53-204ENST00000372243 UBXN11Q5T124 520 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 SAAL1Q96ER3 474 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 CNOT6LQ96LI5 555 aaKnown RBP17.27■□□□□ 0.35
TMEM53-204ENST00000372243 TMX1Q9H3N1 280 aa17.27■□□□□ 0.35
TMEM53-204ENST00000372243 PRDM5Q9NQX1 630 aaPredicted RBP17.27■□□□□ 0.35
TMEM53-204ENST00000372243 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.35
TMEM53-204ENST00000372243 ZNF233A6NK53 670 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 RAG1P15918 1043 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 CDK11BP21127 795 aaKnown RBP17.26■□□□□ 0.35
TMEM53-204ENST00000372243 GRM5P41594 1212 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 KCNJ12Q14500 433 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 TWF2Q6IBS0 349 aaKnown RBP17.26■□□□□ 0.35
TMEM53-204ENST00000372243 MFSD5Q6N075 450 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 CRELD2Q6UXH1 353 aaPredicted RBP17.26■□□□□ 0.35
TMEM53-204ENST00000372243 INTS8Q75QN2 995 aaKnown RBP17.26■□□□□ 0.35
TMEM53-204ENST00000372243 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 ANKRD20A12PQ8NF67 263 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 SEPT8Q92599 483 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 BORCS6Q96GS4 357 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 SCLYQ96I15 445 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 FAM213AQ9BRX8 229 aa17.26■□□□□ 0.35
TMEM53-204ENST00000372243 CPSF3Q9UKF6 684 aaKnown RBP17.26■□□□□ 0.35
TMEM53-204ENST00000372243 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 LRRC10BA6NIK2 292 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 NPTXRO95502 500 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 CLTAP09496 248 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 RAB27AP51159 221 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 CCDC40Q4G0X9 1142 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 CBWD2Q8IUF1 395 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 ZSWIM2Q8NEG5 633 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 MFSD14AQ96MC6 490 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
TMEM53-204ENST00000372243 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
TMEM53-204ENST00000372243 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 PRKAG2Q9UGJ0 569 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 ARMCX3Q9UH62 379 aaPredicted RBP17.25■□□□□ 0.35
TMEM53-204ENST00000372243 LIMA1Q9UHB6 759 aaKnown RBP17.25■□□□□ 0.35
TMEM53-204ENST00000372243 SCN5AQ14524 2016 aa17.25■□□□□ 0.35
TMEM53-204ENST00000372243 ZNF623O75123 536 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 HARSP12081 509 aaKnown RBP17.24■□□□□ 0.35
TMEM53-204ENST00000372243 SKIP12755 728 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 ATP1A3P13637 1013 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 ITGB8P26012 769 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 ACOT2P49753 483 aa17.24■□□□□ 0.35
TMEM53-204ENST00000372243 HSP90AA4PQ58FG1 418 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms