RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RARRES1P49788 294 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 PSMC5P62195 406 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 ITIH3Q06033 890 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 KLHL30Q0D2K2 578 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 ITGB3BPQ13352 177 aaPredicted RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 IQSEC1Q6DN90 963 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 ZNF746Q6NUN9 644 aaPredicted RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 SLC30A10Q6XR72 485 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 HVCN1Q96D96 273 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 DRC1Q96MC2 740 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 CCDC43Q96MW1 224 aaKnown RBP15.31■□□□□ 0.04
LDB3-204ENST00000372066 SPAG5Q96R06 1193 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 TAAR1Q96RJ0 339 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 AGPAT3Q9NRZ7 376 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 ZNF446Q9NWS9 450 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 CYP39A1Q9NYL5 469 aa15.31■□□□□ 0.04
LDB3-204ENST00000372066 MAPK13O15264 365 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 CD4P01730 458 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 ZSCAN20P17040 1043 aaPredicted RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 TCP1P17987 556 aaKnown RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 EIF2AK2P19525 551 aaKnown RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 PON1P27169 355 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 TCERG1LQ5VWI1 586 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 DPY19L2P1Q6NXN4 242 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 ZNF572Q7Z3I7 529 aaPredicted RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 SMAP1Q8IYB5 467 aaPredicted RBP15.3■□□□□ 0.04
LDB3-204ENST00000372066 CDHR1Q96JP9 859 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
LDB3-204ENST00000372066 MACROD2A1Z1Q3 448 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 K7ENM7 598 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
LDB3-204ENST00000372066 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
LDB3-204ENST00000372066 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
LDB3-204ENST00000372066 PLS3P13797 630 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 PBX2P40425 430 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 FBXO16Q8IX29 292 aaPredicted RBP15.29■□□□□ 0.04
LDB3-204ENST00000372066 SLC43A3Q8NBI5 491 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 RUBCNQ92622 972 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 ACCSQ96QU6 501 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 ANKZF1Q9H8Y5 726 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 GCNT4Q9P109 453 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 LCTP09848 1927 aa15.29■□□□□ 0.04
LDB3-204ENST00000372066 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 CLIC2O15247 247 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 FGBP02675 491 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 FERP16591 822 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 CASP4P49662 377 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 GFPT1Q06210 699 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 RASIP1Q5U651 963 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 VSIG10LQ86VR7 867 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 DAW1Q8N136 415 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 ARID3AQ99856 593 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 RNF14Q9UBS8 474 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 Q9Y3F1 56 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 FHOD1Q9Y613 1164 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 NFASCO94856 1347 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 MYH9P35579 1960 aaKnown RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 TARSL2A2RTX5 802 aaKnown RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 ZBTB39O15060 712 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 P4HA2O15460 535 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 CCDC172P0C7W6 258 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 MYCLP12524 364 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 SLC9A1P19634 815 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 ABCD1P33897 745 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 FMO5P49326 533 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 JAM2P57087 298 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 FAM193AP78312 1265 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 CBX1P83916 185 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 GABPB1Q06547 395 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 KCNA1Q09470 495 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 HERVK_113Q902F9 699 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 INPP4AQ96PE3 977 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 GAS2L1Q99501 681 aaPredicted RBP15.28■□□□□ 0.04
LDB3-204ENST00000372066 SEZ6LQ9BYH1 1024 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms