RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CATSPERGQ6ZRH7 1159 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 CCDC60Q8IWA6 550 aaPredicted RBP31.18■■■□□ 2.58
SSBP3-204ENST00000371320 HELQQ8TDG4 1101 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 A1CFQ9NQ94 594 aaKnown RBP31.18■■■□□ 2.58
SSBP3-204ENST00000371320 RAB20Q9NX57 234 aa31.18■■■□□ 2.58
SSBP3-204ENST00000371320 HNRNPDLO14979 420 aaKnown RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 ATP2A1O14983 1001 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 ZNF211Q13398 564 aaPredicted RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 CLUL1Q15846 466 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 TAS1R2Q8TE23 839 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 ALG3Q92685 438 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 IFT74Q96LB3 600 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 ATP6V0A4Q9HBG4 840 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 ACP6Q9NPH0 428 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 XPNPEP1Q9NQW7 623 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 CYP26B1Q9NR63 512 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 TMOD4Q9NZQ9 345 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 UTP11Q9Y3A2 253 aaKnown RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 NR2E1Q9Y466 385 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 PHIPQ8WWQ0 1821 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 COL11A1P12107 1806 aaPredicted RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 GOLGA6L10A0A0M3HER8 536 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 MIF4GDA9UHW6 222 aaKnown RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 DAPK3O43293 454 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 RTP1P59025 263 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 GNPTABQ3T906 1256 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 LRRC45Q96CN5 670 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 BICD1Q96G01 975 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 CAPS2Q9BXY5 557 aa31.17■■■□□ 2.58
SSBP3-204ENST00000371320 CELF4Q9BZC1 486 aaKnown RBP31.17■■■□□ 2.58
SSBP3-204ENST00000371320 LTBP3Q9NS15 1303 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 TMEM110-MUSTN1A8MSY1 372 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 SORBS3O60504 671 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 STAM2O75886 525 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 MMEP08473 750 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 PTENP60484 403 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 POU5F1Q01860 360 aaKnown RBP31.16■■■□□ 2.58
SSBP3-204ENST00000371320 PPP2R5EQ16537 467 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 BRDTQ58F21 947 aaPredicted RBP31.16■■■□□ 2.58
SSBP3-204ENST00000371320 ABHD15Q6UXT9 468 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 GPD1LQ8N335 351 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 UBL4BQ8N7F7 174 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 PLAAQ9Y263 795 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 RLFQ13129 1914 aa31.16■■■□□ 2.58
SSBP3-204ENST00000371320 SPATA31C2B4DYI2 1134 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 DLATP10515 647 aaKnown RBP31.15■■■□□ 2.58
SSBP3-204ENST00000371320 FMO1Q01740 532 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 NEUROG2Q9H2A3 272 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 CYP11B1P15538 503 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 GARTP22102 1010 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 KCTD16Q68DU8 428 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 MIS18BP1Q6P0N0 1132 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 FOXR1Q6PIV2 292 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 SV2AQ7L0J3 742 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 ADAT2Q7Z6V5 191 aaKnown RBP31.15■■■□□ 2.58
SSBP3-204ENST00000371320 SEC14L1Q92503 715 aa31.15■■■□□ 2.58
SSBP3-204ENST00000371320 PDE6CP51160 858 aa31.14■■■□□ 2.58
SSBP3-204ENST00000371320 IRAK1P51617 712 aa31.14■■■□□ 2.58
SSBP3-204ENST00000371320 DNAJC21Q5F1R6 531 aaKnown RBP31.14■■■□□ 2.58
SSBP3-204ENST00000371320 RPS6KC1Q96S38 1066 aa31.14■■■□□ 2.58
SSBP3-204ENST00000371320 POLR3FQ9H1D9 316 aaPredicted RBP31.14■■■□□ 2.58
SSBP3-204ENST00000371320 FAM114A2Q9NRY5 505 aa31.14■■■□□ 2.58
SSBP3-204ENST00000371320 CHORDC1Q9UHD1 332 aaPredicted RBP31.14■■■□□ 2.58
SSBP3-204ENST00000371320 MTA2O94776 668 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 HSD17B3P37058 310 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 MESDQ14696 234 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 SH2D3CQ8N5H7 860 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 KLRG1Q96E93 195 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 FAM213AQ9BRX8 229 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 HOXC10Q9NYD6 342 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 BRCA1P38398 1863 aaKnown RBP31.13■■■□□ 2.57
SSBP3-204ENST00000371320 H0YCG3 227 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 CDR2Q01850 454 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 XKR3Q5GH77 459 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 ZSWIM1Q9BR11 485 aa31.13■■■□□ 2.57
SSBP3-204ENST00000371320 SYNGAP1Q96PV0 1343 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 ZNF541Q9H0D2 1346 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 ATMINO43313 823 aaPredicted RBP31.12■■■□□ 2.57
SSBP3-204ENST00000371320 SKOR1P84550 965 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 KCTD19Q17RG1 926 aaPredicted RBP31.12■■■□□ 2.57
SSBP3-204ENST00000371320 MTERF2Q49AM1 385 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 LRIG3Q6UXM1 1119 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 KRT35Q92764 455 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 RAB17Q9H0T7 212 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 ARHGAP28Q9P2N2 729 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 KIAA1217Q5T5P2 1943 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 PPFIA4O75335 1185 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 SUPT20HL2P0C7V6 817 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 COMTP21964 271 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 DR1Q01658 176 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 SUPT20HL1Q3ZLR7 823 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 TAS1R3Q7RTX0 852 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 MORC4Q8TE76 937 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 TATDN2Q93075 761 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 DPH5Q9H2P9 285 aa31.12■■■□□ 2.57
SSBP3-204ENST00000371320 ABCD1P33897 745 aa31.11■■■□□ 2.57
SSBP3-204ENST00000371320 ENPEPQ07075 957 aa31.11■■■□□ 2.57
SSBP3-204ENST00000371320 TRIM51Q9BSJ1 452 aa31.11■■■□□ 2.57
SSBP3-204ENST00000371320 MTFR1LQ9H019 292 aa31.11■■■□□ 2.57
SSBP3-204ENST00000371320 ERVK-5Q9HDB9 667 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms