RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ZNF560Q96MR9 790 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 SRPK1Q96SB4 655 aaKnown RBP9.07□□□□□ -0.96
ABCA4-201ENST00000370225 MAGEB5Q9BZ81 275 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 SENP1Q9P0U3 644 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 PPARGC1AQ9UBK2 798 aaKnown RBP9.07□□□□□ -0.96
ABCA4-201ENST00000370225 CDHR2Q9BYE9 1310 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 NRKQ7Z2Y5 1582 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 NLRP11P59045 1033 aaKnown RBP9.07□□□□□ -0.96
ABCA4-201ENST00000370225 CDK17Q00537 523 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 APBA1Q02410 837 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 FASTKD1Q53R41 847 aaKnown RBP9.07□□□□□ -0.96
ABCA4-201ENST00000370225 KRT39Q6A163 491 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 PANX2Q96RD6 677 aa9.07□□□□□ -0.96
ABCA4-201ENST00000370225 APOL1O14791 398 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 GH1P01241 217 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PEX19P40855 299 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 AMHR2Q16671 573 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 SLC26A7Q8TE54 656 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PARD6BQ9BYG5 372 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 CYP26B1Q9NR63 512 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 KIF17Q9P2E2 1029 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NCAPD2Q15021 1401 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 DIAPH2O60879 1101 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 KRT37O76014 449 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 DDHD2O94830 711 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 AKT1P31749 480 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 BCAR1P56945 870 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 RAD51Q06609 339 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NUGGCQ68CJ6 796 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PID1Q7Z2X4 250 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ZBED8Q8IZ13 594 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PPP2R3CQ969Q6 453 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PGBD4Q96DM1 585 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ARHGAP31Q2M1Z3 1444 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 FOXN1O15353 648 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ZSCAN9O15535 394 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 HSPA8P11142 646 aaKnown RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 TMEM132DQ14C87 1099 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ANKMY2Q8IV38 441 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 SMAP1Q8IYB5 467 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 CAPN11Q9UMQ6 739 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PHLPP2Q6ZVD8 1323 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 UBE2Q2LH0YL09 131 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ETFBP38117 255 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PDIA2Q13087 525 aaKnown RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 TFDP2Q14188 446 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 PDCD2Q16342 344 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 IER5Q5VY09 327 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 KRT80Q6KB66 452 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NBPF10Q6P3W6 841 aaKnown RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NFRKBQ6P4R8 1299 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NSUN4Q96CB9 384 aaKnown RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 KLHL29Q96CT2 875 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 NEUROG2Q9H2A3 272 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 TRAPPC3O43617 180 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 ITGA4P13612 1032 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 EPM2AIP1Q7L775 607 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 MB21D2Q8IYB1 491 aaPredicted RBP9.06□□□□□ -0.96
ABCA4-201ENST00000370225 DPF3Q92784 378 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 FAM49BQ9NUQ9 324 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 AIPL1Q9NZN9 384 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 SH3BP1Q9Y3L3 701 aa9.06□□□□□ -0.96
ABCA4-201ENST00000370225 RSPH10B2B2RC85 870 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ABCC3O15438 1527 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 KCNN4O15554 427 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 RSPH10BP0C881 870 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 EFCAB12Q6NXP0 572 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 KLK14Q9P0G3 267 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 JCADQ9P266 1359 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 MID2Q9UJV3 735 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 SYNGAP1Q96PV0 1343 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 PPP3CCP48454 512 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ELAC2Q9BQ52 826 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 TEX13BQ9BXU2 312 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 TRPV6Q9H1D0 765 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 LSM7Q9UK45 103 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CHRNA3P32297 505 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 IFNA8P32881 189 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 GTF2H3Q13889 308 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CEP55Q53EZ4 464 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 GPRC5AQ8NFJ5 357 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 PABPC5Q96DU9 382 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 CEP19Q96LK0 163 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 ABCB6Q9NP58 842 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.05□□□□□ -0.96
ABCA4-201ENST00000370225 NDUFB10O96000 172 aa9.05□□□□□ -0.96
ABCA4-201ENST00000370225 GRAMD1BQ3KR37 738 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms