RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TMEM184AQ6ZMB5 413 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 HSCBQ8IWL3 235 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 MRPL43Q8N983 215 aaKnown RBP22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 CDCA3Q99618 268 aaPredicted RBP22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 TCF25Q9BQ70 676 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 ZBP1Q9H171 429 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 IRAK3Q9Y616 596 aa22.63■■□□□ 1.21
SMNDC1-201ENST00000369592 PHLPP2Q6ZVD8 1323 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 K7ERI5 159 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 ABLIM1O14639 778 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 PLS3P13797 630 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 PLCG1P19174 1290 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 AKAP5P24588 427 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 MARCKSP29966 332 aaPredicted RBP22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 SCNN1GP51170 649 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 RNASELQ05823 741 aaKnown RBP22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 DMP1Q13316 513 aaPredicted RBP22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 PUS10Q3MIT2 529 aaKnown RBP22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 CALML4Q96GE6 196 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 TMEM169Q96HH4 297 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 EPSTI1Q96J88 318 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 CDK5RAP3Q96JB5 506 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 TRIM6Q9C030 488 aaPredicted RBP22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 IGFLR1Q9H665 355 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 TLE6Q9H808 572 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 MARCH5Q9NX47 278 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 TNFSF13BQ9Y275 285 aa22.62■■□□□ 1.21
SMNDC1-201ENST00000369592 PIEZO1Q92508 2521 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 NPHP3-ACAD11A0A0J9YXS1 232 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 C2orf71A6NGG8 1288 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 CCDC169A6NNP5 214 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 SFI1A8K8P3 1242 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 NRP1O14786 923 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 PROZP22891 400 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 ZNF131P52739 623 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 ATF7IP2Q5U623 682 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 PLPP4Q5VZY2 271 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 PTCRAQ6ISU1 281 aaPredicted RBP22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 RBM23Q86U06 439 aaKnown RBP22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 HACE1Q8IYU2 909 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 RNF168Q8IYW5 571 aaPredicted RBP22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 TMEM161BQ8NDZ6 487 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 MICAL1Q8TDZ2 1067 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 RAD54LQ92698 747 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 CLIC6Q96NY7 704 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 ACO2Q99798 780 aaKnown RBP22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 GBP3Q9H0R5 595 aa22.61■■□□□ 1.21
SMNDC1-201ENST00000369592 PER2O15055 1255 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 ALDH2P05091 517 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 CTSAP10619 480 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 PDIA4P13667 645 aaKnown RBP22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 COASYQ13057 564 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 NAB2Q15742 525 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 VPS52Q8N1B4 723 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 APOL6Q9BWW8 343 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 CXCL16Q9H2A7 254 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 KMT5AQ9NQR1 393 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 ENTPD7Q9NQZ7 604 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 ODF2LQ9ULJ1 636 aa22.6■■□□□ 1.21
SMNDC1-201ENST00000369592 FSD2A1L4K1 749 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 PTGESO14684 152 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 SLC16A4O15374 487 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 LILRB3O75022 631 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 BRD1O95696 1058 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 SSBP05455 408 aaKnown RBP eCLIP22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 MAPTP10636 758 aaKnown RBP22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 IL9P15248 144 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 RAD51AP2Q09MP3 1159 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 MCM6Q14566 821 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 SMC1AQ14683 1233 aaKnown RBP22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 DCAF4L1Q3SXM0 396 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 SPECC1Q5M775 1068 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 TMC7Q7Z402 723 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 FAM178BQ8IXR5 827 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 LINC00301Q8NCQ3 95 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 REEP2Q9BRK0 252 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 SNTG2Q9NY99 539 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 KLK14Q9P0G3 267 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 KCNG1Q9UIX4 513 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 FAN1Q9Y2M0 1017 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 C5orf42Q9H799 3197 aa22.59■■□□□ 1.21
SMNDC1-201ENST00000369592 FAM86C2PA6NEL3 165 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 MBTPS2O43462 519 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 RECQL4O94761 1208 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 LIG1P18858 919 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 DDIT3P35638 169 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 NCKAP1LP55160 1127 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 CEBPZQ03701 1054 aaKnown RBP22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 GRIK3Q13003 919 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 GIT2Q14161 759 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 GPBP1Q86WP2 473 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 SMRP1Q8NCR6 262 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 FAM193BQ96PV7 902 aaPredicted RBP22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 FIZ1Q96SL8 496 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 ADPGKQ9BRR6 497 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 MRPL4Q9BYD3 311 aaKnown RBP22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 STK39Q9UEW8 545 aa22.58■■□□□ 1.21
SMNDC1-201ENST00000369592 PARP2Q9UGN5 583 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms