RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ATP2C1P98194 919 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 LACTB2Q53H82 288 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CEP85LQ5SZL2 805 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 POTEHQ6S545 545 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CCDC73Q6ZRK6 1079 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 ZC3H3Q8IXZ2 948 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CPXCR1Q8N123 301 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 SLC26A6Q9BXS9 759 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 STYXL1Q9Y6J8 313 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CAPN7Q9Y6W3 813 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 LAMA1P25391 3075 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 DOCK8Q8NF50 2099 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 TFRCP02786 760 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 EZRP15311 586 aaKnown RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 TAP1Q03518 808 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 XRCC4Q13426 336 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 SNCBQ16143 134 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CCDC38Q502W7 563 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 GALNT15Q8N3T1 639 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 SPDYE1Q8NFV5 336 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-204ENST00000369530 OR6J1Q8NGC5 347 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 CFAP45Q9UL16 551 aa7.49□□□□□ -1.21
CSDE1-204ENST00000369530 MYO1FO00160 1098 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF286BP0CG31 522 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 EIF2AK2P19525 551 aaKnown RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 BLIDQ8IZY5 108 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 NME8Q8N427 588 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CCDC47Q96A33 483 aaKnown RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 PNKPQ96T60 521 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 SDF4Q9BRK5 362 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ABCB6Q9NP58 842 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ADGRA3Q8IWK6 1321 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 SCN1AP35498 2009 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 hCG_1642624A0A1W2PR95 340 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 LRRIQ3A6PVS8 624 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ANKRD65E5RJM6 399 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 PIGRP01833 764 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 TCF7P36402 384 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ADCY7P51828 1080 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 SLC12A3P55017 1021 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 SAFBQ15424 915 aaKnown RBP eCLIP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 KIAA0753Q2KHM9 967 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CCDC40Q4G0X9 1142 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CNKSR3Q6P9H4 555 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 PARP9Q8IXQ6 854 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 TRIM22Q8IYM9 498 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ZNF687Q8N1G0 1237 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 P3H4Q92791 437 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 MSLNLQ96KJ4 702 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CASD1Q96PB1 797 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 IQCGQ9H095 443 aaKnown RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 HPCAL4Q9UM19 191 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 DMXL1Q9Y485 3027 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 PENKP01210 267 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CSF2RAP15509 400 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 PBX2P40425 430 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 TRAPPC10P48553 1259 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 CCT5P48643 541 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 MICALCLQ6ZW33 695 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 FAM20AQ96MK3 541 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ALG1Q9BT22 464 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 FTOQ9C0B1 505 aaKnown RBP eCLIP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 ST6GALNAC4Q9H4F1 302 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 SLC40A1Q9NP59 571 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 DACT1Q9NYF0 836 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 VPS54Q9P1Q0 977 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 GMEB1Q9Y692 573 aa7.48□□□□□ -1.21
CSDE1-204ENST00000369530 TCF20Q9UGU0 1960 aaKnown RBP7.48□□□□□ -1.21
CSDE1-204ENST00000369530 TARSL2A2RTX5 802 aaKnown RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 GGPS1O95749 300 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 PYGLP06737 847 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 HOXD13P35453 343 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 LTBRP36941 435 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 MTMR1Q13613 665 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 LAMB3Q13751 1172 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 C11orf57Q6ZUT1 292 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TMEM106CQ9BVX2 250 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 RTEL1Q9NZ71 1219 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 A0A087X0B3 334 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 LCHNA4D1U4 455 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 SHISA7A6NL88 538 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 URI1O94763 535 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 POU2F2P09086 479 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ALADP13716 330 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 NR5A1Q13285 461 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 BLMHQ13867 455 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 KCNB1Q14721 858 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ACBD5Q5T8D3 534 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 C7orf61Q8IZ16 206 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TRIM58Q8NG06 486 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 EPAS1Q99814 870 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TRIM7Q9C029 511 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-204ENST00000369530 TBC1D22BQ9NU19 505 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 ASB3Q9Y575 518 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 GOLGA6L19H0YKK7 550 aa7.47□□□□□ -1.21
CSDE1-204ENST00000369530 H3BRB1 525 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms