RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FOSBP53539 338 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 SLC27A1Q6PCB7 646 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 CATSPER3Q86XQ3 398 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 ACSF2Q96CM8 615 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-202ENST00000368436 COLEC11Q9BWP8 271 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 APOL6Q9BWW8 343 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 RHOBTB2Q9BYZ6 727 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 TRIM6Q9C030 488 aaPredicted RBP17.77■□□□□ 0.44
CKS1B-202ENST00000368436 TUFT1Q9NNX1 390 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 F8W810 466 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
CKS1B-202ENST00000368436 NR1I2O75469 434 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 PAPLNO95428 1278 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 C1RP00736 705 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 ADH1AP07327 375 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 AKAP5P24588 427 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 DSG1Q02413 1049 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 CYP26C1Q6V0L0 522 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 CCDC149Q6ZUS6 474 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 OTOP3Q7RTS5 596 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 CDR2LQ86X02 465 aaPredicted RBP17.76■□□□□ 0.43
CKS1B-202ENST00000368436 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 PRIMPOLQ96LW4 560 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 POLR3CQ9BUI4 534 aaPredicted RBP17.76■□□□□ 0.43
CKS1B-202ENST00000368436 IRF2BPLQ9H1B7 796 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 GPRC5CQ9NQ84 441 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 MAN1C1Q9NR34 630 aa17.76■□□□□ 0.43
CKS1B-202ENST00000368436 SPDYE4A6NLX3 237 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 MED24O75448 989 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 NPTXRO95502 500 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 MCM7P33993 719 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 FAM187BQ17R55 369 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 CDCA2Q69YH5 1023 aaPredicted RBP17.75■□□□□ 0.43
CKS1B-202ENST00000368436 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 HDAC7Q8WUI4 952 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 NACC1Q96RE7 527 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 FZD8Q9H461 694 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 PRMT7Q9NVM4 692 aaPredicted RBP17.75■□□□□ 0.43
CKS1B-202ENST00000368436 DPP7Q9UHL4 492 aa17.75■□□□□ 0.43
CKS1B-202ENST00000368436 LRRIQ4A6NIV6 560 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 SEC24BO95487 1268 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 GLUD1P00367 558 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 ATP2B1P20020 1258 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 GRIK3Q13003 919 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 ORC2Q13416 577 aaPredicted RBP17.74■□□□□ 0.43
CKS1B-202ENST00000368436 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
CKS1B-202ENST00000368436 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 TMEM105Q8N8V8 129 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
CKS1B-202ENST00000368436 CCDC195A0A1B0GUA6 201 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
CKS1B-202ENST00000368436 RPA1P27694 616 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 TDGQ13569 410 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 FUT10Q6P4F1 479 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 ELMSAN1Q6PJG2 1045 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 LLPHQ9BRT6 129 aaKnown RBP17.73■□□□□ 0.43
CKS1B-202ENST00000368436 KCNK12Q9HB15 430 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 WDR6Q9NNW5 1121 aaKnown RBP17.73■□□□□ 0.43
CKS1B-202ENST00000368436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.73■□□□□ 0.43
CKS1B-202ENST00000368436 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 FNIP2Q9P278 1114 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 PARP2Q9UGN5 583 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 ADAM28Q9UKQ2 775 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 LIMCH1Q9UPQ0 1083 aa17.73■□□□□ 0.43
CKS1B-202ENST00000368436 DOCK8Q8NF50 2099 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 CYP11B2P19099 503 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 CLCN5P51795 746 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 ASTLQ6HA08 431 aaPredicted RBP17.72■□□□□ 0.43
CKS1B-202ENST00000368436 LILRA6Q6PI73 481 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 POTEGQ6S5H5 508 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 ZBTB8OSQ8IWT0 167 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 ERMNQ8TAM6 284 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 BSNDQ8WZ55 320 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 B3GALT6Q96L58 329 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
CKS1B-202ENST00000368436 PLEKHA4Q9H4M7 779 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 FAM86C1Q9NVL1 165 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 IGSF9Q9P2J2 1179 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 CACNA1HO95180 2353 aa17.72■□□□□ 0.43
CKS1B-202ENST00000368436 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 TGM5O43548 720 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 N4BP1O75113 896 aaKnown RBP17.71■□□□□ 0.43
CKS1B-202ENST00000368436 RFPL2O75678 378 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 OR52Z1P0C646 297 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 MUTP22033 750 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 HSP90AA2PQ14568 343 aaPredicted RBP17.71■□□□□ 0.43
CKS1B-202ENST00000368436 ZNF174Q15697 407 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 PADI6Q6TGC4 694 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 PALB2Q86YC2 1186 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 RABGGTAQ92696 567 aa17.71■□□□□ 0.43
CKS1B-202ENST00000368436 ATOH1Q92858 354 aaPredicted RBP17.71■□□□□ 0.43
CKS1B-202ENST00000368436 ZNF707Q96C28 371 aaPredicted RBP17.71■□□□□ 0.43
CKS1B-202ENST00000368436 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms