RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 FRMD7Q6ZUT3 714 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 RTN4RL1Q86UN2 441 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 ZNF610Q8N9Z0 462 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 SLC5A5Q92911 643 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 FOXRED1Q96CU9 486 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 HOMER2Q9NSB8 354 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 USP36Q9P275 1121 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 SAE1Q9UBE0 346 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 RNF7Q9UBF6 113 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 DENND2AQ9ULE3 1009 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 FRMD4BQ9Y2L6 1034 aa4.75□□□□□ -1.65
ECHDC1-201ENST00000368287 WASHC2CQ9Y4E1 1318 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 IKBKBO14920 756 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 TRIM24O15164 1050 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 GYPEP15421 78 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 AVPR1BP47901 424 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 BCAR1P56945 870 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SESN3P58005 492 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 ADCY2Q08462 1091 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 TERF2Q15554 542 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 BROXQ5VW32 411 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 KRT40Q6A162 431 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 IQSEC1Q6DN90 963 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 ESPNLQ6ZVH7 1005 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 RASSF3Q86WH2 238 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 CXorf67Q86X51 503 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 RAVER1Q8IY67 606 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 LCORLQ8N3X6 602 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 CLRN3Q8NCR9 226 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SMG7Q92540 1137 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 ZNF512Q96ME7 567 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SERHL2Q9H4I8 314 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SLC5A4Q9NY91 659 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 KLHL42Q9P2K6 505 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 SYNPO2Q9UMS6 1093 aa4.74□□□□□ -1.65
ECHDC1-201ENST00000368287 PRPF6O94906 941 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 PRLP01236 227 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 GNAT2P19087 354 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ZFP36P26651 326 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 RGS3P49796 1198 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 DCAF17Q5H9S7 520 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 RNF219Q5W0B1 726 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 SPATS2Q86XZ4 545 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 CMIPQ8IY22 773 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 BOLLQ8N9W6 283 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 SCARB1Q8WTV0 552 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ST8SIA2Q92186 375 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 FERMT2Q96AC1 680 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 MYEOVQ96EZ4 313 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 BRIP1Q9BX63 1249 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ASPSCR1Q9BZE9 553 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 WDR11Q9BZH6 1224 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ZMAT4Q9H898 229 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ANKFY1Q9P2R3 1169 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 MAGEL2Q9UJ55 1249 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 MSRAQ9UJ68 235 aa4.73□□□□□ -1.65
ECHDC1-201ENST00000368287 ST20-MTHFSA0A0A6YYL1 179 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 ZNF185O15231 689 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 LPXNO60711 386 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 VSIG10L2P0DP72 767 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 TYRP1P17643 537 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 HK1P19367 917 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 PTH2RP49190 550 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 ELLP55199 621 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 PRR16Q569H4 304 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 KIAA1841Q6NSI8 718 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 CNTD1Q8N815 330 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 MTMR8Q96EF0 704 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 MYL10Q9BUA6 226 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 POFUT1Q9H488 388 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 ZNF768Q9H5H4 540 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 KCMF1Q9P0J7 381 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 NCDNQ9UBB6 729 aa4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 THRAP3Q9Y2W1 955 aaKnown RBP4.72□□□□□ -1.65
ECHDC1-201ENST00000368287 KDM1AO60341 852 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 TOX4O94842 621 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 MAPK7Q13164 816 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 DGKDQ16760 1214 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 CCDC62Q6P9F0 684 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 NECAB2Q7Z6G3 386 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 CMTR2Q8IYT2 770 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 ZNF496Q96IT1 587 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 SMAD5Q99717 465 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 EIF2B4Q9UI10 523 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 TRHDEQ9UKU6 1024 aa4.71□□□□□ -1.66
ECHDC1-201ENST00000368287 ALG1L2C9J202 215 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 GABRDO14764 452 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 CXCR5P32302 372 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 ERVK-21P61565 698 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 EXOSC10Q01780 885 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 ITKQ08881 620 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 MYBPC3Q14896 1274 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 PDCD1Q15116 288 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 KANSL1Q7Z3B3 1105 aa4.7□□□□□ -1.66
ECHDC1-201ENST00000368287 BMP8AQ7Z5Y6 402 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms