RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 FGFR1OP2Q9NVK5 253 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 STX18Q9P2W9 335 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 RWDD3Q9Y3V2 267 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PGK2P07205 417 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ITGA4P13612 1032 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 PLTPP55058 493 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 BCAR1P56945 870 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 UPF3AQ9H1J1 476 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM45Q9H8W5 580 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ZNF70Q9UC06 446 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TSC22D4Q9Y3Q8 395 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM17Q9Y577 477 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ERVK-7P63135 1459 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SUPT3HB4E1H0 165 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 LAD1O00515 517 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ACADMP11310 421 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ART3Q13508 389 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 IER5Q5VY09 327 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KRT74Q7RTS7 529 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ADCK1Q86TW2 530 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 LRRC49Q8IUZ0 686 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 EIF2AK1Q9BQI3 630 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 DHX35Q9H5Z1 703 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 DONSONQ9NYP3 566 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 JRKLQ9Y4A0 524 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TNS3Q68CZ2 1445 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 H0Y626 953 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TTI1O43156 1089 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM16O95361 564 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CYP21A2P08686 494 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 GNA15P30679 374 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ACOT2P49753 483 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CPT1AP50416 773 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 KPNA1P52294 538 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 BAATQ14032 418 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 BBS9Q3SYG4 887 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ATG16L1Q676U5 607 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 LDHDQ86WU2 507 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SFR1Q86XK3 245 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CPB2Q96IY4 423 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 FAM167AQ96KS9 214 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SMAD5Q99717 465 aaKnown RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 UNC45AQ9H3U1 944 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ANAPC7Q9UJX3 599 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CRB1P82279 1406 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TBC1D12O60347 775 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ENDOD1O94919 500 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 NDUFA5Q16718 116 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 NUGGCQ68CJ6 796 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 TMTC3Q6ZXV5 915 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 ARHGAP18Q8N392 663 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 EXOC4Q96A65 974 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 MTBPQ96DY7 904 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 AGAP3Q96P47 875 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 SENP6Q9GZR1 1112 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 RBAKQ9NYW8 714 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-201ENST00000368147 CAPN7Q9Y6W3 813 aa7.49□□□□□ -1.21
SPTA1-201ENST00000368147 GRAP2O75791 330 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 VPS37AQ8NEZ2 397 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 TBC1D16Q8TBP0 767 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 GIPC2Q8TF65 315 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 QKIQ96PU8 341 aaKnown RBP eCLIP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 LSG1Q9H089 658 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ITIH6Q6UXX5 1313 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 NPTXRO95502 500 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 LDHAP00338 332 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 AKR1B1P15121 316 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ZNF235Q14590 738 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ARMC6Q6NXE6 501 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 EFCAB12Q6NXP0 572 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 TTC23LQ6PF05 361 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 RNF26Q9BY78 433 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 STK17AQ9UEE5 414 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 H7C0S8 307 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ZSCAN9O15535 394 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ATP9BO43861 1147 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 DEAF1O75398 565 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 SUN1O94901 812 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 LIG3P49916 1009 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 DGKDQ16760 1214 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 TJAP1Q5JTD0 557 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ULK4Q96C45 1275 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 ZFYVE19Q96K21 471 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 UTP6Q9NYH9 597 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 LSM7Q9UK45 103 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 CAB39Q9Y376 341 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 SYNMO15061 1565 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 GGPS1O95749 300 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 GCFC2P16383 781 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 HDLBPQ00341 1268 aaKnown RBP7.48□□□□□ -1.21
SPTA1-201ENST00000368147 TWF1Q12792 350 aa7.48□□□□□ -1.21
SPTA1-201ENST00000368147 COG2Q14746 738 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms