RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 LARP4BQ92615 738 aaKnown RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 RAD54LQ92698 747 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
CD48-202ENST00000368046 ADPGKQ9BRR6 497 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 NRDE2Q9H7Z3 1164 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 TBC1D13Q9NVG8 400 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 ARHGAP28Q9P2N2 729 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 THEGQ9P2T0 379 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 CFAP45Q9UL16 551 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 INPP5FQ9Y2H2 1132 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 USP20Q9Y2K6 914 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 HES2Q9Y543 173 aa10.85□□□□□ -0.67
CD48-202ENST00000368046 NPHP3-ACAD11A0A0J9YXS1 232 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 ARL5CA6NH57 179 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 NT5C1B-RDH14C9J2C7 533 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 SLC16A4O15374 487 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 DDHD2O94830 711 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 NPTXRO95502 500 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 POMCP01189 267 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 KRT18P05783 430 aaKnown RBP10.84□□□□□ -0.67
CD48-202ENST00000368046 GALTP07902 379 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 AKAP5P24588 427 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 AFF1P51825 1210 aaKnown RBP10.84□□□□□ -0.67
CD48-202ENST00000368046 ERVFC1P60507 584 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 PKP1Q13835 747 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 BECN1Q14457 450 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 TCEAL5Q5H9L2 206 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 CCDC73Q6ZRK6 1079 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 SV2BQ7L1I2 683 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 GPBP1Q86WP2 473 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 ZNF280BQ86YH2 543 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 SLC39A11Q8N1S5 342 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 LRRC15Q8TF66 581 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 PPP2R3CQ969Q6 453 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 FAM193BQ96PV7 902 aaPredicted RBP10.84□□□□□ -0.67
CD48-202ENST00000368046 ASB2Q96Q27 587 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 GAD1Q99259 594 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
CD48-202ENST00000368046 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 KIFC3Q9BVG8 833 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 PANK2Q9BZ23 570 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 PDZD7Q9H5P4 517 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 MIOSQ9NXC5 875 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 PARP2Q9UGN5 583 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 TNFSF13BQ9Y275 285 aa10.84□□□□□ -0.67
CD48-202ENST00000368046 H0YCG3 227 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 CUTAO60888 179 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.68
CD48-202ENST00000368046 NR1I2O75469 434 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 BRD1O95696 1058 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 EDN1P05305 212 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 SCP2P22307 547 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 IRS1P35568 1242 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 PBX3P40426 434 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 ZNF131P52739 623 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 STRN3Q13033 797 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 EEF1DP3Q658K8 133 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 TMC7Q7Z402 723 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 HAUS6Q7Z4H7 955 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 APBB1IPQ7Z5R6 666 aaPredicted RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 MYCT1Q8N699 235 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 TMEM161BQ8NDZ6 487 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 GSTCDQ8NEC7 633 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 KCNN1Q92952 543 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 TMEM169Q96HH4 297 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 TCHPQ9BT92 498 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 APOL6Q9BWW8 343 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 MRPL4Q9BYD3 311 aaKnown RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 GBP3Q9H0R5 595 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 NGRNQ9NPE2 291 aaKnown RBP10.83□□□□□ -0.68
CD48-202ENST00000368046 TLR9Q9NR96 1032 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 SNTG2Q9NY99 539 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 DNAJB4Q9UDY4 337 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 STK39Q9UEW8 545 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 RCOR1Q9UKL0 485 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 FAN1Q9Y2M0 1017 aa10.83□□□□□ -0.68
CD48-202ENST00000368046 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 NRP1O14786 923 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 TRAK2O60296 914 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 FAM13AO94988 1023 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 MAPTP10636 758 aaKnown RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 MLH1P40692 756 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 SLC11A1P49279 550 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 SCNN1GP51170 649 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 NCKAP1LP55160 1127 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 TFF2Q03403 129 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
CD48-202ENST00000368046 HYAL1Q12794 435 aa10.82□□□□□ -0.68
CD48-202ENST00000368046 ADAM15Q13444 863 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms