RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TTC7AQ9ULT0 858 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-202ENST00000367279 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
PTPN7-202ENST00000367279 APBA3O96018 575 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 ADRB2P07550 413 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 PDE6CP51160 858 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 CCDC50Q8IVM0 306 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 ZDHHC14Q8IZN3 488 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 ANKRD42Q8N9B4 389 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 EPS8L1Q8TE68 723 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 BICD1Q96G01 975 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 CNOT10Q9H9A5 744 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 COL20A1Q9P218 1284 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SIPA1L1O43166 1804 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SCN9AQ15858 1988 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 DNM1LO00429 736 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 RARAP10276 462 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 PLS3P13797 630 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 QARSP47897 775 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 RARRES1P49788 294 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 MFAP3P55082 362 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 MTMR1Q13613 665 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 BYSLQ13895 437 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 ATG4AQ8WYN0 398 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 COILP38432 576 aaPredicted RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 PTGIRP43119 386 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
PTPN7-202ENST00000367279 NFIL3Q16649 462 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 DAB2IPQ5VWQ8 1189 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 CCDC197Q8NCU1 140 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SEC14L1Q92503 715 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 SEMA4DQ92854 862 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 HVCN1Q96D96 273 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 GRHL1Q9NZI5 618 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
PTPN7-202ENST00000367279 CHRNB2P17787 502 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 UGCGQ16739 394 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 FAM133BQ5BKY9 247 aaKnown RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 SLC13A5Q86YT5 568 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 LRRC34Q8IZ02 419 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 TATDN2Q93075 761 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 HEMGNQ9BXL5 484 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 SAMD15Q9P1V8 674 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 PODXLO00592 558 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ECEL1O95672 775 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 RFX1P22670 979 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 RWDD2BP57060 319 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 RIT2Q99578 217 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 MRIQ9BWK5 157 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 FAM129AQ9BZQ8 928 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 PFASO15067 1338 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 LTBP1Q14766 1721 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 DRD4P21917 467 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 MAPK4P31152 587 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 YTHDF3Q7Z739 585 aaKnown RBP13.23□□□□□ -0.29
PTPN7-202ENST00000367279 KCTD17Q8N5Z5 321 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 NT5C1BQ96P26 610 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 EPB41L4BQ9H329 900 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
PTPN7-202ENST00000367279 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 BHMG1C9JSJ3 638 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-202ENST00000367279 CYP11B1P15538 503 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 HSPA6P17066 643 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 KRT17Q04695 432 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 CLUL1Q15846 466 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 C6orf89Q6UWU4 347 aa13.22□□□□□ -0.29
PTPN7-202ENST00000367279 SLC9A9Q8IVB4 645 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms