RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MYCT1Q8N699 235 aa15.85■□□□□ 0.13
PRKN-204ENST00000366896 TMEM174Q8WUU8 243 aa15.85■□□□□ 0.13
PRKN-204ENST00000366896 LPAR1Q92633 364 aa15.85■□□□□ 0.13
PRKN-204ENST00000366896 XPO6Q96QU8 1125 aaKnown RBP15.85■□□□□ 0.13
PRKN-204ENST00000366896 NAP1L3Q99457 506 aaPredicted RBP15.85■□□□□ 0.13
PRKN-204ENST00000366896 CELF4Q9BZC1 486 aaKnown RBP15.85■□□□□ 0.13
PRKN-204ENST00000366896 PTPRFP10586 1907 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 UNCXA6NJT0 531 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CCT8L1PA6NM43 557 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 TTI1O43156 1089 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
PRKN-204ENST00000366896 FMO5P49326 533 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CLNS1AP54105 237 aaKnown RBP15.84■□□□□ 0.13
PRKN-204ENST00000366896 CST9Q5W186 159 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 SLC9A9Q8IVB4 645 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 DYDC2Q96IM9 177 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 FAM129AQ9BZQ8 928 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 NOD2Q9HC29 1040 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 SMCHD1A6NHR9 2005 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 BUB1BO60566 1050 aaPredicted RBP15.84■□□□□ 0.13
PRKN-204ENST00000366896 FAM13AO94988 1023 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CBWD6Q4V339 395 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CBWD3Q5JTY5 395 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CBWD5Q5RIA9 395 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 OTOP1Q7RTM1 612 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 C2orf69Q8N8R5 385 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 CCDC197Q8NCU1 140 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 FIZ1Q96SL8 496 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 GPR88Q9GZN0 384 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 NR2E1Q9Y466 385 aa15.84■□□□□ 0.13
PRKN-204ENST00000366896 PASKQ96RG2 1323 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 C19orf81C9J6K1 198 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 WDR46O15213 610 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 RTN2O75298 545 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 PSMD10O75832 226 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 GSTA1P08263 222 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 TRIM49P0CI25 452 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 TRIM49CP0CI26 452 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 EIF3BP55884 814 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 DHX9Q08211 1270 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 C12orf42Q96LP6 360 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 ZNF317Q96PQ6 595 aaPredicted RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 RAB17Q9H0T7 212 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 LRRC4CQ9HCJ2 640 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.83■□□□□ 0.12
PRKN-204ENST00000366896 PPP1R9AQ9ULJ8 1098 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 UTP11Q9Y3A2 253 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 DDX3YO15523 660 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 SLITRK3O94933 977 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 ABCB4P21439 1286 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 CYP2J2P51589 502 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 HMGCS2P54868 508 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 DRG2P55039 364 aaKnown RBP15.83■□□□□ 0.12
PRKN-204ENST00000366896 PTENP60484 403 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 DCAF12L1Q5VU92 463 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 HS2ST1Q7LGA3 356 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 SLC35G2Q8TBE7 412 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 TXLNGYQ9BZA5 131 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 DNAJC12Q9UKB3 198 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 SLC12A4Q9UP95 1085 aa15.83■□□□□ 0.12
PRKN-204ENST00000366896 TULP1O00294 542 aaPredicted RBP15.82■□□□□ 0.12
PRKN-204ENST00000366896 VCAM1P19320 739 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 UBXN2AP68543 259 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PLS1Q14651 629 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 HIBCHQ6NVY1 386 aaPredicted RBP15.82■□□□□ 0.12
PRKN-204ENST00000366896 ZNF720Q7Z2F6 126 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PALB2Q86YC2 1186 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 MDM1Q8TC05 714 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 CTNNBL1Q8WYA6 563 aaPredicted RBP15.82■□□□□ 0.12
PRKN-204ENST00000366896 SLC5A5Q92911 643 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 ARHGEF26Q96DR7 871 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 TRIM51Q9BSJ1 452 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 DPH5Q9H2P9 285 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.82■□□□□ 0.12
PRKN-204ENST00000366896 TAS2R14Q9NYV8 317 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 WRAP73Q9P2S5 460 aaPredicted RBP15.82■□□□□ 0.12
PRKN-204ENST00000366896 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 FAM187AA6NFU0 413 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 IRF6O14896 467 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PPFIA2O75334 1257 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 FGGP02679 453 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PAX7P23759 505 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 SLC8A3P57103 927 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PPIL2Q13356 520 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 KIF22Q14807 665 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 PPP1R7Q15435 360 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 CRELD2Q6UXH1 353 aaPredicted RBP15.82■□□□□ 0.12
PRKN-204ENST00000366896 MAB21L3Q8N8X9 362 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 OPTNQ96CV9 577 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 EBF2Q9HAK2 575 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 APEX2Q9UBZ4 518 aa15.82■□□□□ 0.12
PRKN-204ENST00000366896 ANKRD62A6NC57 917 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 ASAP2O43150 1006 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 PLA2G6O60733 806 aa15.81■□□□□ 0.12
PRKN-204ENST00000366896 HSPA6P17066 643 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms