RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TFAP2CQ92754 450 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 CAVIN3Q969G5 261 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 BBC3Q96PG8 261 aaPredicted RBP3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 TEX101Q9BY14 249 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 ANO3Q9BYT9 981 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 WNT8AQ9H1J5 351 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 SYNPO2LQ9H987 977 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 SPTLC3Q9NUV7 552 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 POGKQ9P215 609 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 EVLQ9UI08 416 aaPredicted RBP3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 PRSS50Q9UI38 385 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 NUMBLQ9Y6R0 609 aa3.48□□□□□ -1.85
RNU4-42P-201ENST00000364738 COL4A3Q01955 1670 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 ZNF185O15231 689 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 RAB11FIP3O75154 756 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 TMEM127O75204 238 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 ITGA10O75578 1167 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 HLA-DOAP06340 250 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 DDX6P26196 483 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 BMPR1AP36894 532 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 ADCYAP1R1P41586 468 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 LSSP48449 732 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 CLK3P49761 638 aaKnown RBP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 C21orf58P58505 322 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 PCBP1Q15365 356 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 SEPT7Q16181 437 aaKnown RBP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 TKFCQ3LXA3 575 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 CCDC144BQ3MJ40 725 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 PDCD4Q53EL6 469 aaKnown RBP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 ANKS6Q68DC2 871 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 EFCAB12Q6NXP0 572 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 SYCE2Q6PIF2 218 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 BTNL9Q6UXG8 535 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 FRMD7Q6ZUT3 714 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 C16orf86Q6ZW13 317 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 LYSMD2Q8IV50 215 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 NIM1KQ8IY84 436 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 OR2W6PQ8NHA6 318 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 OR14C36Q8NHC7 312 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 MDM1Q8TC05 714 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 RSAD2Q8WXG1 361 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 NINJ1Q92982 152 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 RNPC3Q96LT9 517 aaKnown RBP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 TARS2Q9BW92 718 aaKnown RBP3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 SYBUQ9NX95 663 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 TMPRSS11EQ9UL52 423 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 ZMYM3Q14202 1370 aa3.47□□□□□ -1.85
RNU4-42P-201ENST00000364738 SPATA31A6Q5VVP1 1343 aa3.46□□□□□ -1.85
RNU4-42P-201ENST00000364738 HKR1P10072 659 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 RBP3P10745 1247 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 TYRP1P17643 537 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 CD38P28907 300 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 SEC24CP53992 1094 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 MXRA7P84157 204 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 TRIM25Q14258 630 aaKnown RBP3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 CSRP2Q16527 193 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 DDB1Q16531 1140 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ERCC6LQ2NKX8 1250 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ZKSCAN2Q63HK3 967 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ABHD15Q6UXT9 468 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 RD3Q7Z3Z2 195 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 DHX37Q8IY37 1157 aaKnown RBP3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ZFP28Q8NHY6 868 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 NTN5Q8WTR8 489 aaPredicted RBP3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ZNF480Q8WV37 535 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 SNX33Q8WV41 574 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 LINC00476Q8WZB0 136 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 COQ10AQ96MF6 247 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 KCTD10Q9H3F6 313 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 R3HDMLQ9H3Y0 253 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 PRDM12Q9H4Q4 367 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 ADARB2Q9NS39 739 aaKnown RBP3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 GPRC5DQ9NZD1 345 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 KCNG1Q9UIX4 513 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 USP15Q9Y4E8 981 aaPredicted RBP3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 CDY2AQ9Y6F7 541 aa3.46□□□□□ -1.86
RNU4-42P-201ENST00000364738 MARCH11A6NNE9 402 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 TBKBP1A7MCY6 615 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 SPDEFO95238 335 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 FKBP9O95302 570 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 GASTP01350 101 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 ZNF37AP17032 561 aaPredicted RBP3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 CANXP27824 592 aaKnown RBP3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 CXCR5P32302 372 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 BLOC1S1P78537 153 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 HNRNPA0Q13151 305 aaKnown RBP3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 TP53BP2Q13625 1128 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 C19orf54Q5BKX5 351 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 PITRM1Q5JRX3 1037 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 MFSD14BQ5SR56 506 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 PRAMEF14Q5SWL7 426 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 BROXQ5VW32 411 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 FKBP9P1Q75LS8 142 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 PDZD4Q76G19 769 aaPredicted RBP3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 SLC41A1Q8IVJ1 513 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 AHI1Q8N157 1196 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 ASB10Q8WXI3 467 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 APPBP2Q92624 585 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 SLC5A5Q92911 643 aa3.45□□□□□ -1.86
RNU4-42P-201ENST00000364738 CEP95Q96GE4 821 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms