RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
IFT140-201ENST00000361339 XRCC4Q13426 336 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
IFT140-201ENST00000361339 RUFY4Q6ZNE9 571 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 EGFL6Q8IUX8 553 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 SYT11Q9BT88 431 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 STK33Q9BYT3 514 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 APEX2Q9UBZ4 518 aa17.41■□□□□ 0.38
IFT140-201ENST00000361339 BZW2Q9Y6E2 419 aaKnown RBP17.41■□□□□ 0.38
IFT140-201ENST00000361339 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 TMEM110-MUSTN1A8MSY1 372 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 H0YGN5 161 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 MGRN1O60291 552 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 CAND2O75155 1236 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 CCNE2O96020 404 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 DRD4P21917 467 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 MARCKSL1P49006 195 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
IFT140-201ENST00000361339 SCFD2Q8WU76 684 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
IFT140-201ENST00000361339 MLXIPLQ9NP71 852 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
IFT140-201ENST00000361339 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 KRIT1O00522 736 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 AP1G2O75843 785 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 ADRB2P07550 413 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 FERP16591 822 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 LRRC45Q96CN5 670 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 CHMP6Q96FZ7 201 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 CHN1P15882 459 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 MTMR1Q13613 665 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 MTMR2Q13614 643 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 MREGQ8N565 214 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 ARMC2Q8NEN0 867 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 RUBCNQ92622 972 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 ERVK-5Q9HDB9 667 aa17.4■□□□□ 0.38
IFT140-201ENST00000361339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.4■□□□□ 0.38
IFT140-201ENST00000361339 GTPBP10A4D1E9 387 aaKnown RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 SHBGP04278 402 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 MMEP08473 750 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 BZW1Q7L1Q6 419 aaKnown RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 FAM160B2Q86V87 743 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 CBWD2Q8IUF1 395 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 LRRC34Q8IZ02 419 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 ZNF483Q8TF39 744 aaPredicted RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 BTBD6Q96KE9 485 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 ABCF3Q9NUQ8 709 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 STK24Q9Y6E0 443 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 COL2A1P02458 1487 aaPredicted RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 TESPA1A2RU30 521 aaPredicted RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 BTNL10A8MVZ5 291 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 PEX10O60683 326 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 FGGP02679 453 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 SNX1Q13596 522 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 LRRC14Q15048 493 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 THEMIS2Q5TEJ8 643 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 ALG3Q92685 438 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 XPO6Q96QU8 1125 aaKnown RBP17.39■□□□□ 0.37
IFT140-201ENST00000361339 PSMD1Q99460 953 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 AGAP1Q9UPQ3 857 aa17.39■□□□□ 0.37
IFT140-201ENST00000361339 ASNSP08243 561 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
IFT140-201ENST00000361339 SLFN11Q7Z7L1 901 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 RNF14Q9UBS8 474 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 PGRMC1O00264 195 aaKnown RBP17.38■□□□□ 0.37
IFT140-201ENST00000361339 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
IFT140-201ENST00000361339 MAP2K1Q02750 393 aaPredicted RBP17.38■□□□□ 0.37
IFT140-201ENST00000361339 FAM102BQ5T8I3 360 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 HAUS6Q7Z4H7 955 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 VPS36Q86VN1 386 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 ANKS4BQ8N8V4 417 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 KRT35Q92764 455 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 SEMA4DQ92854 862 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 PCDHB18PQ96TA0 734 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 RIT2Q99578 217 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 PRMT1Q99873 361 aaKnown RBP17.38■□□□□ 0.37
IFT140-201ENST00000361339 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.38■□□□□ 0.373e-14■■□□□ 13.8
IFT140-201ENST00000361339 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 HSPBP1Q9NZL4 362 aa17.38■□□□□ 0.37
IFT140-201ENST00000361339 RPTORQ8N122 1335 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 SGPL1O95470 568 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 TNFAIP3P21580 790 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 RXRBP28702 533 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 CAPRIN2Q6IMN6 1127 aaKnown RBP17.37■□□□□ 0.37
IFT140-201ENST00000361339 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 TEPSINQ96N21 525 aa17.37■□□□□ 0.37
IFT140-201ENST00000361339 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms