RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TOPORSQ9NS56 1045 aaPredicted RBP24.4■■□□□ 1.5
LDB1-201ENST00000361198 USP20Q9Y2K6 914 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 STXBP5LQ9Y2K9 1186 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 NCANO14594 1321 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 BRDTQ58F21 947 aaPredicted RBP24.4■■□□□ 1.5
LDB1-201ENST00000361198 VTI1AQ96AJ9 217 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 ARHGEF26Q96DR7 871 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 KREMEN1Q96MU8 473 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 THAP2Q9H0W7 228 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 FBXO40Q9UH90 709 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 NFU1Q9UMS0 254 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 PAPPA2Q9BXP8 1791 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 POLGP54098 1239 aaPredicted RBP24.39■■□□□ 1.5
LDB1-201ENST00000361198 GUCY2DQ02846 1103 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 EMC2Q15006 297 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 NT5DC3Q86UY8 548 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 PPM1KQ8N3J5 372 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 ZIM3Q96PE6 472 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 KRT12Q99456 494 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 SPATC1LQ9H0A9 340 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 ELP3Q9H9T3 547 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 TMEM8AQ9HCN3 771 aa24.39■■□□□ 1.5
LDB1-201ENST00000361198 A0A0G2JMZ2 1700 aa24.39■■□□□ 1.49
LDB1-201ENST00000361198 USP8P40818 1118 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 SKOR1P84550 965 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 CYP24A1Q07973 514 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 TTMPQ5BVD1 217 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 NCAPG2Q86XI2 1143 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 C10orf67Q8IYJ2 551 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 SYCE1Q8N0S2 351 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 METTL13Q8N6R0 699 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 EIF1ADQ8N9N8 165 aaKnown RBP24.38■■□□□ 1.49
LDB1-201ENST00000361198 TMEM143Q96AN5 459 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 ARL8AQ96BM9 186 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 BICD1Q96G01 975 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 OTUD5Q96G74 571 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 PBKQ96KB5 322 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 RUFY1Q96T51 708 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 CAPS2Q9BXY5 557 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 COQ4Q9Y3A0 265 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 ZSCAN5CA6NGD5 496 aaPredicted RBP24.38■■□□□ 1.49
LDB1-201ENST00000361198 BUB1BO60566 1050 aaPredicted RBP24.38■■□□□ 1.49
LDB1-201ENST00000361198 OATP04181 439 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 UBA1P22314 1058 aaKnown RBP24.38■■□□□ 1.49
LDB1-201ENST00000361198 GPD1LQ8N335 351 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 TMC2Q8TDI7 906 aa24.38■■□□□ 1.49
LDB1-201ENST00000361198 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.38■■□□□ 1.49
LDB1-201ENST00000361198 SUCLA2Q9P2R7 463 aaPredicted RBP24.38■■□□□ 1.49
LDB1-201ENST00000361198 ANKRD62A6NC57 917 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 SOWAHBA6NEL2 793 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 A6NNZ2 444 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 FAM153BP0C7A2 387 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 GARTP22102 1010 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 TNNC1P63316 161 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 TUBB8Q3ZCM7 444 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 FAM153CQ494X1 144 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 TAS1R2Q8TE23 839 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 CLMNQ96JQ2 1002 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 R3HDMLQ9H3Y0 253 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 FAM153AQ9UHL3 310 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 CEP104O60308 925 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 SGPL1O95470 568 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 DLATP10515 647 aaKnown RBP24.37■■□□□ 1.49
LDB1-201ENST00000361198 PPATQ06203 517 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 CD302Q8IX05 232 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 FAM71AQ8IYT1 594 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 RPUSD2Q8IZ73 545 aaKnown RBP24.37■■□□□ 1.49
LDB1-201ENST00000361198 WHAMMQ8TF30 809 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 CASKIN2Q8WXE0 1202 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 FAM213AQ9BRX8 229 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 PAGR1Q9BTK6 254 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 ACP6Q9NPH0 428 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 RNF181Q9P0P0 153 aa24.37■■□□□ 1.49
LDB1-201ENST00000361198 A0A0G2JLL6 359 aaPredicted RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 EDNRBP24530 442 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 GPC3P51654 580 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 DNAJC21Q5F1R6 531 aaKnown RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 SV2AQ7L0J3 742 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 PRRT2Q7Z6L0 340 aaPredicted RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 FBXL13Q8NEE6 735 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 ACTRT1Q8TDG2 376 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 EPS8L1Q8TE68 723 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 SCFD2Q8WU76 684 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 ELMO3Q96BJ8 720 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 HES6Q96HZ4 224 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 PLEKHA4Q9H4M7 779 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 DHX33Q9H6R0 707 aaKnown RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 GRIN2DO15399 1336 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 IGKV6D-21A0A0A0MT36 114 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 ESYT3A0FGR9 886 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 FARP2O94887 1054 aaPredicted RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 IREB2P48200 963 aaKnown RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 CORO7P57737 925 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 IRX3P78415 501 aaPredicted RBP24.36■■□□□ 1.49
LDB1-201ENST00000361198 MOB2Q70IA6 237 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 HELQQ8TDG4 1101 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 RAB20Q9NX57 234 aa24.36■■□□□ 1.49
LDB1-201ENST00000361198 GSTTP1A0A1W2PQM5 241 aa24.35■■□□□ 1.49
LDB1-201ENST00000361198 EIF3HO15372 352 aaKnown RBP eCLIP24.35■■□□□ 1.49
LDB1-201ENST00000361198 CYP26A1O43174 497 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms