RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 WDR18Q9BV38 432 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 PCIF1Q9H4Z3 704 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 ARHGEF3Q9NR81 526 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 HOMER3Q9NSC5 361 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 PRKAG3Q9UGI9 489 aa11.69□□□□□ -0.54
RPE-202ENST00000359429 EMSYQ7Z589 1322 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 IGLV3-22A0A075B6J6 115 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 EXOC3O60645 756 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 DLATP10515 647 aaKnown RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 CACNB3P54284 484 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 SLC8A3P57103 927 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 SNX1Q13596 522 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 BZW1Q7L1Q6 419 aaKnown RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 ASRGL1Q7L266 308 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 MIGA2Q7L4E1 593 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 HS2ST1Q7LGA3 356 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 OTOP1Q7RTM1 612 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 NOP9Q86U38 636 aaKnown RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 REM2Q8IYK8 340 aaPredicted RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 RPS6KC1Q96S38 1066 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 AMNQ9BXJ7 453 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 ROPN1BQ9BZX4 212 aaPredicted RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 ROPN1Q9HAT0 212 aaPredicted RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 CLDN3O15551 220 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 SUN1O94901 812 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 GJB6O95452 261 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 GBP1P32455 592 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 ZNF76P36508 570 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 PPP2R5AQ15172 486 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 TRIP13Q15645 432 aaPredicted RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 CLUL1Q15846 466 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 KYNUQ16719 465 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 ODR4Q5SWX8 454 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 FAM182BQ5T319 152 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 NSMFQ6X4W1 530 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 SPATA21Q7Z572 469 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 CROCCP2Q86T23 111 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 CKAP2Q8WWK9 683 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 STMN4Q9H169 189 aaPredicted RBP11.68□□□□□ -0.54
RPE-202ENST00000359429 ARHGEF10LQ9HCE6 1279 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 PCDHAC2Q9Y5I4 1007 aa11.68□□□□□ -0.54
RPE-202ENST00000359429 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 GCLMP48507 274 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 ZNF131P52739 623 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 TCEAL1Q15170 157 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 RHBDF2Q6PJF5 856 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 RNF207Q6ZRF8 634 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 CCHCR1Q8TD31 782 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 ADAM22Q9P0K1 906 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 SPOPO43791 374 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 ECEL1O95672 775 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 GGPS1O95749 300 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 IVDP26440 423 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 MSH2P43246 934 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 UBXN2AP68543 259 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 KRT17Q04695 432 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 TCP10Q12799 353 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 TRMT10CQ7L0Y3 403 aaKnown RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 MAEAQ7L5Y9 396 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 SLC47A2Q86VL8 602 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 FBXO11Q86XK2 927 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 EPS8L1Q8TE68 723 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 UTP4Q969X6 686 aaKnown RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 ELMO3Q96BJ8 720 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 NUP85Q9BW27 656 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 LRRC19Q9H756 370 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 SLC5A4Q9NY91 659 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 TBK1Q9UHD2 729 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 NOCTQ9UK39 431 aaKnown RBP11.67□□□□□ -0.54
RPE-202ENST00000359429 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
RPE-202ENST00000359429 F5H6K3 240 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 BCRP11274 1271 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 BRAFP15056 766 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 MAP2K1Q02750 393 aaPredicted RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 CALCOCO2Q13137 446 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 DAW1Q8N136 415 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 ZNF564Q8TBZ8 553 aaPredicted RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 DCAF4Q8WV16 495 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 MKL1Q969V6 931 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 TGS1Q96RS0 853 aaKnown RBP11.66□□□□□ -0.54
RPE-202ENST00000359429 TAOK3Q9H2K8 898 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
RPE-202ENST00000359429 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms