RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ARHGEF19Q8IW93 802 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 XXYLT1Q8NBI6 393 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 RDM1Q8NG50 284 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 AFG1LQ8WV93 481 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SEPT1Q8WYJ6 367 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF775Q96BV0 537 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CALR3Q96L12 384 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CEP89Q96ST8 783 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PI4K2AQ9BTU6 479 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 TARS2Q9BW92 718 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 IFIH1Q9BYX4 1025 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 GOLPH3Q9H4A6 298 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 MROH8Q9H579 483 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 AZI2Q9H6S1 392 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PNMA3Q9UL41 463 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 FAM184BQ9ULE4 1060 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PCDHA13Q9Y5I0 950 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NCK2O43639 380 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SNAI1O95863 264 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SETSIPP0DME0 302 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CYLC1P35663 651 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 USP8P40818 1118 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NLRP11P59045 1033 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 KLHL30Q0D2K2 578 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CAPSQ13938 189 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ASIC2Q16515 512 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CCL14Q16627 93 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF792Q3KQV3 632 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 TAPT1Q6NXT6 567 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF571Q7Z3V5 609 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SDR16C5Q8N3Y7 309 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 KCTD17Q8N5Z5 321 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NPLOC4Q8TAT6 608 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 DEPTORQ8TB45 409 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SLC7A3Q8WY07 619 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 ANKRD7Q92527 254 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 KIFAP3Q92845 792 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SEMA4DQ92854 862 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 IFT74Q96LB3 600 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 NLRP4Q96MN2 994 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 HINFPQ9BQA5 517 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 INTS2Q9H0H0 1204 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 DHX33Q9H6R0 707 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 SLC24A3Q9HC58 644 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CHORDC1Q9UHD1 332 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-202ENST00000359366 DNAJC12Q9UKB3 198 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 CAPN6Q9Y6Q1 641 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 IVNS1ABPQ9Y6Y0 642 aa5.52□□□□□ -1.53
ATXN3-202ENST00000359366 PTPRJQ12913 1337 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PHLPP2Q6ZVD8 1323 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ZC3H4Q9UPT8 1303 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 IGKV6D-21A0A0A0MT36 114 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 LRRIQ3A6PVS8 624 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 EIF3CLB5ME19 914 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF185O15231 689 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ATP1A1P05023 1023 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 KRT13P13646 458 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SSTR3P32745 418 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CYP2C19P33261 490 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 LIG4P49917 911 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 NAP1L1P55209 391 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 OSTNP61366 133 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PPP2R3AQ06190 1150 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ARHGAP1Q07960 439 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 DRAP1Q14919 205 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PLCB4Q15147 1175 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SPA17Q15506 151 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 MAMDC4Q6UXC1 1216 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 IRF2BP2Q7Z5L9 587 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 PALB2Q86YC2 1186 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 RHPN2Q8IUC4 686 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 MCPH1Q8NEM0 835 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 DHX38Q92620 1227 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CAPZA3Q96KX2 299 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 EIF3CQ99613 913 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM117Q9H0C3 514 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM206Q9H813 350 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SEPT11Q9NVA2 429 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SMARCAL1Q9NZC9 954 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 FLRT1Q9NZU1 646 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CWC15Q9P013 229 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ARHGAP28Q9P2N2 729 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 KAT6AQ92794 2004 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 UBE4BO95155 1302 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 ANKRD33BA6NCL7 494 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 FOXN3O00409 490 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 B4GALT5O43286 388 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CTIFO43310 598 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SLU7O95391 586 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 SMPD1P17405 629 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 HNRNPH3P31942 346 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 CXCR5P32302 372 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TNFSF9P41273 254 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 MAGEA1P43355 309 aa5.51□□□□□ -1.53
ATXN3-202ENST00000359366 MRPS25P82663 173 aaKnown RBP5.51□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM62Q0P6H9 643 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms