RNA–Protein interactions for RNA: ENST00000359333.7

TMEM139-201, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 2,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-201ENST00000359333 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
TMEM139-201ENST00000359333 SEPT11Q9NVA2 429 aaKnown RBP16.4■□□□□ 0.22
TMEM139-201ENST00000359333 COG5Q9UP83 839 aa16.4■□□□□ 0.22
TMEM139-201ENST00000359333 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 PENKP01210 267 aaPredicted RBP16.39■□□□□ 0.21
TMEM139-201ENST00000359333 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 AP1B1Q10567 949 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 TAF1BQ53T94 588 aaPredicted RBP16.39■□□□□ 0.21
TMEM139-201ENST00000359333 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 KRT35Q92764 455 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 NSUN4Q96CB9 384 aaKnown RBP16.39■□□□□ 0.21
TMEM139-201ENST00000359333 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 STK33Q9BYT3 514 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 ZFP69BQ9UJL9 534 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
TMEM139-201ENST00000359333 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 E9PMD0 336 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CAPN9O14815 690 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 RPL13P26373 211 aaKnown RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 MAGEA8P43361 318 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 KCNJ1P48048 391 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SH3BGRP55822 239 aaPredicted RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 WDR4P57081 412 aaKnown RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 PABPC1LQ4VXU2 614 aaKnown RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SLC45A4Q5BKX6 768 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SEPT14Q6ZU15 432 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 OLIG1Q8TAK6 271 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 NRG4Q8WWG1 115 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CCDC28BQ9BUN5 200 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CPVLQ9H3G5 476 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CCDC22O60826 627 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 MCL1Q07820 350 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 TNIP1Q15025 636 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CNPY1Q3B7I2 92 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 HYIQ5T013 277 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 RGS9BPQ6ZS82 235 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 MIPOL1Q8TD10 442 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 CABLES1Q8TDN4 633 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 NCSTNQ92542 709 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 STMN2Q93045 179 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 DHX36Q9H2U1 1008 aaKnown RBP16.38■□□□□ 0.21
TMEM139-201ENST00000359333 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 TMCO1Q9UM00 188 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 KIAA1024Q9UPX6 916 aa16.38■□□□□ 0.21
TMEM139-201ENST00000359333 RASA4BC9J798 803 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 PDXKO00764 312 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 RASA4O43374 803 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 AKAP3O75969 853 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ASMTLO95671 621 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 CHKAP35790 457 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 MECOMQ03112 1051 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 RFWD3Q6PCD5 774 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 SLC13A5Q86YT5 568 aaPredicted RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 SLC35C1Q96A29 364 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 TUBB6Q9BUF5 446 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 WNT8AQ9H1J5 351 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 SYNCQ9H7C4 482 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 TMEM110-MUSTN1A8MSY1 372 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 SLC16A3O15427 465 aaKnown RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ZWINTO95229 277 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 CAV1Q03135 178 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 DRAP1Q14919 205 aaPredicted RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 RHBDF2Q6PJF5 856 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 C12orf50Q8NA57 414 aaPredicted RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ZNF184Q99676 751 aaPredicted RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 CADM1Q9BY67 442 aaKnown RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 STX18Q9P2W9 335 aaKnown RBP16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ZNF212Q9UDV6 495 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ASIC3Q9UHC3 531 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
TMEM139-201ENST00000359333 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 ZSCAN9O15535 394 aaPredicted RBP16.36■□□□□ 0.21
TMEM139-201ENST00000359333 KRT36O76013 467 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 PSMG1O95456 288 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 PYGMP11217 842 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 CYP11B2P19099 503 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 NR1H3Q13133 447 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 STAT4Q14765 748 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
TMEM139-201ENST00000359333 RNF207Q6ZRF8 634 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms